Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col25a1Q99MQ5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col25a1Q99MQ5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col25a1Q99MQ5 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.92■■□□□ 1.42
Col25a1Q99MQ5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col25a1Q99MQ5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.92■■□□□ 1.42
Col25a1Q99MQ5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col25a1Q99MQ5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col25a1Q99MQ5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.91■■□□□ 1.42
Col25a1Q99MQ5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.91■■□□□ 1.42
Col25a1Q99MQ5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Col25a1Q99MQ5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col25a1Q99MQ5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Col25a1Q99MQ5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.9■■□□□ 1.42
Col25a1Q99MQ5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col25a1Q99MQ5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col25a1Q99MQ5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col25a1Q99MQ5 Etf1-202ENSMUST00000180351 108 ntBASIC23.89■■□□□ 1.41
Col25a1Q99MQ5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Col25a1Q99MQ5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Col25a1Q99MQ5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.88■■□□□ 1.41
Col25a1Q99MQ5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.88■■□□□ 1.41
Col25a1Q99MQ5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col25a1Q99MQ5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col25a1Q99MQ5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Col25a1Q99MQ5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col25a1Q99MQ5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.84■■□□□ 1.41
Col25a1Q99MQ5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Col25a1Q99MQ5 Gm29257-201ENSMUST00000186115 639 ntBASIC23.83■■□□□ 1.41
Col25a1Q99MQ5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col25a1Q99MQ5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col25a1Q99MQ5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col25a1Q99MQ5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col25a1Q99MQ5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col25a1Q99MQ5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col25a1Q99MQ5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col25a1Q99MQ5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col25a1Q99MQ5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col25a1Q99MQ5 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.8■■□□□ 1.4
Col25a1Q99MQ5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col25a1Q99MQ5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.79■■□□□ 1.4
Col25a1Q99MQ5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col25a1Q99MQ5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col25a1Q99MQ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col25a1Q99MQ5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col25a1Q99MQ5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.78■■□□□ 1.4
Col25a1Q99MQ5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col25a1Q99MQ5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Col25a1Q99MQ5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col25a1Q99MQ5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col25a1Q99MQ5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col25a1Q99MQ5 Amer2-203ENSMUST00000225247 2662 ntBASIC23.77■■□□□ 1.39
Col25a1Q99MQ5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.76■■□□□ 1.39
Col25a1Q99MQ5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col25a1Q99MQ5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col25a1Q99MQ5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col25a1Q99MQ5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Col25a1Q99MQ5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col25a1Q99MQ5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.74■■□□□ 1.39
Col25a1Q99MQ5 Gm37136-201ENSMUST00000194368 194 ntBASIC23.74■■□□□ 1.39
Col25a1Q99MQ5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col25a1Q99MQ5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col25a1Q99MQ5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col25a1Q99MQ5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.73■■□□□ 1.39
Col25a1Q99MQ5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Gm9812-201ENSMUST00000061934 968 ntBASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col25a1Q99MQ5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col25a1Q99MQ5 Gm21956-201ENSMUST00000179946 522 ntBASIC23.71■■□□□ 1.39
Col25a1Q99MQ5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.71■■□□□ 1.39
Col25a1Q99MQ5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Col25a1Q99MQ5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.7■■□□□ 1.38
Col25a1Q99MQ5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.7■■□□□ 1.38
Col25a1Q99MQ5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Col25a1Q99MQ5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col25a1Q99MQ5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col25a1Q99MQ5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.69■■□□□ 1.38
Col25a1Q99MQ5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col25a1Q99MQ5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col25a1Q99MQ5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Col25a1Q99MQ5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col25a1Q99MQ5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col25a1Q99MQ5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms