Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhac1Q91Y10 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhac1Q91Y10 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhac1Q91Y10 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pcdhac1Q91Y10 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.1■□□□□ 0.97
Pcdhac1Q91Y10 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhac1Q91Y10 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhac1Q91Y10 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhac1Q91Y10 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhac1Q91Y10 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhac1Q91Y10 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhac1Q91Y10 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhac1Q91Y10 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhac1Q91Y10 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhac1Q91Y10 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhac1Q91Y10 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhac1Q91Y10 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhac1Q91Y10 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhac1Q91Y10 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhac1Q91Y10 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhac1Q91Y10 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhac1Q91Y10 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhac1Q91Y10 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhac1Q91Y10 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhac1Q91Y10 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhac1Q91Y10 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhac1Q91Y10 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhac1Q91Y10 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pcdhac1Q91Y10 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhac1Q91Y10 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhac1Q91Y10 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21■□□□□ 0.95
Pcdhac1Q91Y10 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhac1Q91Y10 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhac1Q91Y10 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhac1Q91Y10 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhac1Q91Y10 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhac1Q91Y10 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhac1Q91Y10 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhac1Q91Y10 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhac1Q91Y10 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Gm7432-201ENSMUST00000210343 879 ntBASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhac1Q91Y10 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhac1Q91Y10 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhac1Q91Y10 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhac1Q91Y10 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhac1Q91Y10 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhac1Q91Y10 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhac1Q91Y10 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhac1Q91Y10 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhac1Q91Y10 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhac1Q91Y10 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhac1Q91Y10 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhac1Q91Y10 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.91■□□□□ 0.94
Pcdhac1Q91Y10 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms