Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Gm27502-201ENSMUST00000183495 199 ntBASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nle1Q8VEJ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nle1Q8VEJ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nle1Q8VEJ4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nle1Q8VEJ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nle1Q8VEJ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nle1Q8VEJ4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Nle1Q8VEJ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nle1Q8VEJ4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Nle1Q8VEJ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nle1Q8VEJ4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Nle1Q8VEJ4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.66■■□□□ 1.38
Nle1Q8VEJ4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nle1Q8VEJ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nle1Q8VEJ4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nle1Q8VEJ4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nle1Q8VEJ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Nle1Q8VEJ4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.65■■□□□ 1.38
Nle1Q8VEJ4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Nle1Q8VEJ4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nle1Q8VEJ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nle1Q8VEJ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nle1Q8VEJ4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nle1Q8VEJ4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nle1Q8VEJ4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
Nle1Q8VEJ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Nle1Q8VEJ4 Gm14523-201ENSMUST00000117260 558 ntBASIC23.6■■□□□ 1.37
Nle1Q8VEJ4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.6■■□□□ 1.37
Nle1Q8VEJ4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Nle1Q8VEJ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Nle1Q8VEJ4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nle1Q8VEJ4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nle1Q8VEJ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nle1Q8VEJ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.59■■□□□ 1.37
Nle1Q8VEJ4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nle1Q8VEJ4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nle1Q8VEJ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Nle1Q8VEJ4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nle1Q8VEJ4 Gm7332-201ENSMUST00000118351 454 ntBASIC23.57■■□□□ 1.36
Nle1Q8VEJ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.57■■□□□ 1.36
Nle1Q8VEJ4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Nle1Q8VEJ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Nle1Q8VEJ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.56■■□□□ 1.36
Nle1Q8VEJ4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Nle1Q8VEJ4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Nle1Q8VEJ4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nle1Q8VEJ4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Nle1Q8VEJ4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Nle1Q8VEJ4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nle1Q8VEJ4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Nle1Q8VEJ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Nle1Q8VEJ4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.53■■□□□ 1.36
Nle1Q8VEJ4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.53■■□□□ 1.36
Nle1Q8VEJ4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nle1Q8VEJ4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Nle1Q8VEJ4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.52■■□□□ 1.36
Nle1Q8VEJ4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Nle1Q8VEJ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Nle1Q8VEJ4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nle1Q8VEJ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nle1Q8VEJ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Nle1Q8VEJ4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Nle1Q8VEJ4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nle1Q8VEJ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nle1Q8VEJ4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Nle1Q8VEJ4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nle1Q8VEJ4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nle1Q8VEJ4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nle1Q8VEJ4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms