Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cacnb1Q8R3Z5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cacnb1Q8R3Z5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.17■■□□□ 1.62
Cacnb1Q8R3Z5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cacnb1Q8R3Z5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Cacnb1Q8R3Z5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cacnb1Q8R3Z5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cacnb1Q8R3Z5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cacnb1Q8R3Z5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cacnb1Q8R3Z5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cacnb1Q8R3Z5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.13■■□□□ 1.61
Cacnb1Q8R3Z5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.13■■□□□ 1.61
Cacnb1Q8R3Z5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.13■■□□□ 1.61
Cacnb1Q8R3Z5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Cacnb1Q8R3Z5 Gm9812-201ENSMUST00000061934 968 ntBASIC25.12■■□□□ 1.61
Cacnb1Q8R3Z5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cacnb1Q8R3Z5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cacnb1Q8R3Z5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.11■■□□□ 1.61
Cacnb1Q8R3Z5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cacnb1Q8R3Z5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cacnb1Q8R3Z5 Gm43416-201ENSMUST00000201916 1015 ntBASIC25.1■■□□□ 1.61
Cacnb1Q8R3Z5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cacnb1Q8R3Z5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cacnb1Q8R3Z5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cacnb1Q8R3Z5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Cacnb1Q8R3Z5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cacnb1Q8R3Z5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC25.07■■□□□ 1.6
Cacnb1Q8R3Z5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cacnb1Q8R3Z5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cacnb1Q8R3Z5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
Cacnb1Q8R3Z5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cacnb1Q8R3Z5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cacnb1Q8R3Z5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Cacnb1Q8R3Z5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cacnb1Q8R3Z5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cacnb1Q8R3Z5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cacnb1Q8R3Z5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cacnb1Q8R3Z5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Cacnb1Q8R3Z5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cacnb1Q8R3Z5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cacnb1Q8R3Z5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cacnb1Q8R3Z5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.03■■□□□ 1.6
Cacnb1Q8R3Z5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cacnb1Q8R3Z5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.02■■□□□ 1.6
Cacnb1Q8R3Z5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cacnb1Q8R3Z5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Cacnb1Q8R3Z5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 Scarna2-201ENSMUST00000157560 414 ntBASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cacnb1Q8R3Z5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cacnb1Q8R3Z5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cacnb1Q8R3Z5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Cacnb1Q8R3Z5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Cacnb1Q8R3Z5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cacnb1Q8R3Z5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Cacnb1Q8R3Z5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.99■■□□□ 1.59
Cacnb1Q8R3Z5 Gm11175-201ENSMUST00000116172 543 ntBASIC24.99■■□□□ 1.59
Cacnb1Q8R3Z5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Cacnb1Q8R3Z5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.98■■□□□ 1.59
Cacnb1Q8R3Z5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cacnb1Q8R3Z5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cacnb1Q8R3Z5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Terc-201ENSMUST00000082862 423 ntBASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.96■■□□□ 1.59
Cacnb1Q8R3Z5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cacnb1Q8R3Z5 Gm16437-201ENSMUST00000025669 507 ntBASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms