Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.42■■□□□ 1.82
Pspc1Q8R326 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.41■■□□□ 1.82
Pspc1Q8R326 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pspc1Q8R326 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Pspc1Q8R326 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.4■■□□□ 1.82
Pspc1Q8R326 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pspc1Q8R326 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Pspc1Q8R326 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pspc1Q8R326 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Pspc1Q8R326 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Pspc1Q8R326 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pspc1Q8R326 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Pspc1Q8R326 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pspc1Q8R326 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Pspc1Q8R326 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pspc1Q8R326 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.37■■□□□ 1.81
Pspc1Q8R326 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.37■■□□□ 1.81
Pspc1Q8R326 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Pspc1Q8R326 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pspc1Q8R326 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pspc1Q8R326 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pspc1Q8R326 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pspc1Q8R326 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pspc1Q8R326 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pspc1Q8R326 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pspc1Q8R326 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.34■■□□□ 1.81
Pspc1Q8R326 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Pspc1Q8R326 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.34■■□□□ 1.81
Pspc1Q8R326 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pspc1Q8R326 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Pspc1Q8R326 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pspc1Q8R326 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Pspc1Q8R326 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.31■■□□□ 1.8
Pspc1Q8R326 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pspc1Q8R326 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Pspc1Q8R326 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pspc1Q8R326 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Pspc1Q8R326 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.28■■□□□ 1.8
Pspc1Q8R326 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pspc1Q8R326 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pspc1Q8R326 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pspc1Q8R326 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pspc1Q8R326 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pspc1Q8R326 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pspc1Q8R326 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pspc1Q8R326 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pspc1Q8R326 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Pspc1Q8R326 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pspc1Q8R326 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Pspc1Q8R326 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pspc1Q8R326 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Pspc1Q8R326 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.25■■□□□ 1.79
Pspc1Q8R326 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pspc1Q8R326 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pspc1Q8R326 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.24■■□□□ 1.79
Pspc1Q8R326 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pspc1Q8R326 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pspc1Q8R326 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pspc1Q8R326 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pspc1Q8R326 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.23■■□□□ 1.79
Pspc1Q8R326 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.22■■□□□ 1.79
Pspc1Q8R326 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.22■■□□□ 1.79
Pspc1Q8R326 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pspc1Q8R326 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.22■■□□□ 1.79
Pspc1Q8R326 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pspc1Q8R326 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pspc1Q8R326 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pspc1Q8R326 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pspc1Q8R326 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pspc1Q8R326 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pspc1Q8R326 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pspc1Q8R326 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pspc1Q8R326 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pspc1Q8R326 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.17■■□□□ 1.78
Pspc1Q8R326 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Pspc1Q8R326 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pspc1Q8R326 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.16■■□□□ 1.78
Pspc1Q8R326 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Pspc1Q8R326 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pspc1Q8R326 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pspc1Q8R326 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pspc1Q8R326 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
Pspc1Q8R326 Gm10420-201ENSMUST00000121713 882 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms