Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc38a4Q8R1S9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc38a4Q8R1S9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc38a4Q8R1S9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc38a4Q8R1S9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc38a4Q8R1S9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.43■■□□□ 1.02
Slc38a4Q8R1S9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc38a4Q8R1S9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc38a4Q8R1S9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc38a4Q8R1S9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc38a4Q8R1S9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.42■■□□□ 1.02
Slc38a4Q8R1S9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc38a4Q8R1S9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.41■■□□□ 1.02
Slc38a4Q8R1S9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc38a4Q8R1S9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc38a4Q8R1S9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc38a4Q8R1S9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc38a4Q8R1S9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc38a4Q8R1S9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc38a4Q8R1S9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc38a4Q8R1S9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc38a4Q8R1S9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc38a4Q8R1S9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc38a4Q8R1S9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc38a4Q8R1S9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc38a4Q8R1S9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc38a4Q8R1S9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc38a4Q8R1S9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.37■■□□□ 1.01
Slc38a4Q8R1S9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc38a4Q8R1S9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc38a4Q8R1S9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc38a4Q8R1S9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc38a4Q8R1S9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Slc38a4Q8R1S9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc38a4Q8R1S9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc38a4Q8R1S9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.34■■□□□ 1.01
Slc38a4Q8R1S9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc38a4Q8R1S9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc38a4Q8R1S9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc38a4Q8R1S9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc38a4Q8R1S9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc38a4Q8R1S9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc38a4Q8R1S9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc38a4Q8R1S9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc38a4Q8R1S9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc38a4Q8R1S9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc38a4Q8R1S9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc38a4Q8R1S9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.29■■□□□ 1
Slc38a4Q8R1S9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Slc38a4Q8R1S9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc38a4Q8R1S9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc38a4Q8R1S9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc38a4Q8R1S9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc38a4Q8R1S9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc38a4Q8R1S9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.27■■□□□ 1
Slc38a4Q8R1S9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc38a4Q8R1S9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc38a4Q8R1S9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Slc38a4Q8R1S9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc38a4Q8R1S9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc38a4Q8R1S9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc38a4Q8R1S9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms