Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lgi3Q8K406 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lgi3Q8K406 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lgi3Q8K406 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lgi3Q8K406 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.39■□□□□ 0.69
Lgi3Q8K406 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lgi3Q8K406 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lgi3Q8K406 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lgi3Q8K406 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lgi3Q8K406 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.37■□□□□ 0.69
Lgi3Q8K406 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Lgi3Q8K406 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lgi3Q8K406 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lgi3Q8K406 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lgi3Q8K406 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lgi3Q8K406 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.36■□□□□ 0.69
Lgi3Q8K406 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lgi3Q8K406 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lgi3Q8K406 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lgi3Q8K406 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lgi3Q8K406 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lgi3Q8K406 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.35■□□□□ 0.69
Lgi3Q8K406 Gm6821-201ENSMUST00000107540 542 ntBASIC19.35■□□□□ 0.69
Lgi3Q8K406 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lgi3Q8K406 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lgi3Q8K406 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lgi3Q8K406 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lgi3Q8K406 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lgi3Q8K406 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.33■□□□□ 0.69
Lgi3Q8K406 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.33■□□□□ 0.68
Lgi3Q8K406 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lgi3Q8K406 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.32■□□□□ 0.68
Lgi3Q8K406 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lgi3Q8K406 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lgi3Q8K406 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lgi3Q8K406 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lgi3Q8K406 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.3■□□□□ 0.68
Lgi3Q8K406 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.29■□□□□ 0.68
Lgi3Q8K406 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lgi3Q8K406 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lgi3Q8K406 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lgi3Q8K406 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.28■□□□□ 0.68
Lgi3Q8K406 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lgi3Q8K406 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgi3Q8K406 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lgi3Q8K406 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.27■□□□□ 0.67
Lgi3Q8K406 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lgi3Q8K406 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgi3Q8K406 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgi3Q8K406 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgi3Q8K406 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lgi3Q8K406 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lgi3Q8K406 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi3Q8K406 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi3Q8K406 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi3Q8K406 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lgi3Q8K406 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi3Q8K406 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi3Q8K406 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lgi3Q8K406 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi3Q8K406 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.22■□□□□ 0.67
Lgi3Q8K406 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi3Q8K406 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi3Q8K406 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.22■□□□□ 0.67
Lgi3Q8K406 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms