Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Rtn1Q8K0T0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rtn1Q8K0T0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rtn1Q8K0T0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rtn1Q8K0T0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rtn1Q8K0T0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rtn1Q8K0T0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Rtn1Q8K0T0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.29■■□□□ 1.8
Rtn1Q8K0T0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rtn1Q8K0T0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rtn1Q8K0T0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Rtn1Q8K0T0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rtn1Q8K0T0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rtn1Q8K0T0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rtn1Q8K0T0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rtn1Q8K0T0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rtn1Q8K0T0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Rtn1Q8K0T0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rtn1Q8K0T0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rtn1Q8K0T0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rtn1Q8K0T0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rtn1Q8K0T0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rtn1Q8K0T0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rtn1Q8K0T0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.25■■□□□ 1.79
Rtn1Q8K0T0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Rtn1Q8K0T0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn1Q8K0T0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rtn1Q8K0T0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.22■■□□□ 1.79
Rtn1Q8K0T0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rtn1Q8K0T0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtn1Q8K0T0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.22■■□□□ 1.79
Rtn1Q8K0T0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rtn1Q8K0T0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtn1Q8K0T0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtn1Q8K0T0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rtn1Q8K0T0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rtn1Q8K0T0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtn1Q8K0T0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.19■■□□□ 1.78
Rtn1Q8K0T0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rtn1Q8K0T0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rtn1Q8K0T0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Rtn1Q8K0T0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtn1Q8K0T0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Rtn1Q8K0T0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Terc-201ENSMUST00000082862 423 ntBASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rtn1Q8K0T0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rtn1Q8K0T0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn1Q8K0T0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rtn1Q8K0T0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rtn1Q8K0T0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtn1Q8K0T0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rtn1Q8K0T0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtn1Q8K0T0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn1Q8K0T0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rtn1Q8K0T0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rtn1Q8K0T0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rtn1Q8K0T0 Scarna2-201ENSMUST00000157560 414 ntBASIC26.1■■□□□ 1.77
Rtn1Q8K0T0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rtn1Q8K0T0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rtn1Q8K0T0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Rtn1Q8K0T0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn1Q8K0T0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn1Q8K0T0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn1Q8K0T0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn1Q8K0T0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn1Q8K0T0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rtn1Q8K0T0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rtn1Q8K0T0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Rtn1Q8K0T0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Rtn1Q8K0T0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.05■■□□□ 1.76
Rtn1Q8K0T0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rtn1Q8K0T0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.05■■□□□ 1.76
Rtn1Q8K0T0 Gm9806-201ENSMUST00000051080 552 ntBASIC26.05■■□□□ 1.76
Rtn1Q8K0T0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms