Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rtn4rl1Q8K0S5 Amer2-203ENSMUST00000225247 2662 ntBASIC23.59■■□□□ 1.37
Rtn4rl1Q8K0S5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.58■■□□□ 1.37
Rtn4rl1Q8K0S5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rtn4rl1Q8K0S5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm22567-201ENSMUST00000175542 342 ntBASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rtn4rl1Q8K0S5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
Rtn4rl1Q8K0S5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm15546-201ENSMUST00000122095 826 ntBASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rtn4rl1Q8K0S5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn4rl1Q8K0S5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Rtn4rl1Q8K0S5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rtn4rl1Q8K0S5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rtn4rl1Q8K0S5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rtn4rl1Q8K0S5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.48■■□□□ 1.35
Rtn4rl1Q8K0S5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Rtn4rl1Q8K0S5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rtn4rl1Q8K0S5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rtn4rl1Q8K0S5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Rtn4rl1Q8K0S5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Gm13238-201ENSMUST00000117655 780 ntBASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rtn4rl1Q8K0S5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.43■■□□□ 1.34
Rtn4rl1Q8K0S5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rtn4rl1Q8K0S5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rtn4rl1Q8K0S5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.39■■□□□ 1.34
Rtn4rl1Q8K0S5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn4rl1Q8K0S5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rtn4rl1Q8K0S5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rtn4rl1Q8K0S5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rtn4rl1Q8K0S5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.36■■□□□ 1.33
Rtn4rl1Q8K0S5 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.35■■□□□ 1.33
Rtn4rl1Q8K0S5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.34■■□□□ 1.33
Rtn4rl1Q8K0S5 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.34■■□□□ 1.33
Rtn4rl1Q8K0S5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm15039-201ENSMUST00000118914 875 ntBASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Gm43566-201ENSMUST00000196851 808 ntBASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rtn4rl1Q8K0S5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rtn4rl1Q8K0S5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.33■■□□□ 1.32
Rtn4rl1Q8K0S5 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.32■■□□□ 1.32
Rtn4rl1Q8K0S5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rtn4rl1Q8K0S5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms