Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Usp44Q8C2S0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Usp44Q8C2S0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Usp44Q8C2S0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Usp44Q8C2S0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Usp44Q8C2S0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Usp44Q8C2S0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.92■■□□□ 1.9
Usp44Q8C2S0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Usp44Q8C2S0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Usp44Q8C2S0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Usp44Q8C2S0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Usp44Q8C2S0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Usp44Q8C2S0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
Usp44Q8C2S0 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.89■■□□□ 1.9
Usp44Q8C2S0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Usp44Q8C2S0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Usp44Q8C2S0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Usp44Q8C2S0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.88■■□□□ 1.89
Usp44Q8C2S0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Usp44Q8C2S0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Usp44Q8C2S0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Usp44Q8C2S0 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.87■■□□□ 1.89
Usp44Q8C2S0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.87■■□□□ 1.89
Usp44Q8C2S0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.86■■□□□ 1.89
Usp44Q8C2S0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.86■■□□□ 1.89
Usp44Q8C2S0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Usp44Q8C2S0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Usp44Q8C2S0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
Usp44Q8C2S0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Usp44Q8C2S0 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.85■■□□□ 1.89
Usp44Q8C2S0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Usp44Q8C2S0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Usp44Q8C2S0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Usp44Q8C2S0 Gm6311-201ENSMUST00000073790 878 ntBASIC26.84■■□□□ 1.89
Usp44Q8C2S0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Usp44Q8C2S0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Usp44Q8C2S0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Usp44Q8C2S0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Usp44Q8C2S0 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.81■■□□□ 1.88
Usp44Q8C2S0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Usp44Q8C2S0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Usp44Q8C2S0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.8■■□□□ 1.88
Usp44Q8C2S0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Usp44Q8C2S0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Usp44Q8C2S0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Terc-201ENSMUST00000082862 423 ntBASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp44Q8C2S0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Usp44Q8C2S0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Usp44Q8C2S0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Usp44Q8C2S0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Usp44Q8C2S0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Usp44Q8C2S0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Usp44Q8C2S0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp44Q8C2S0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp44Q8C2S0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Usp44Q8C2S0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp44Q8C2S0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp44Q8C2S0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp44Q8C2S0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp44Q8C2S0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp44Q8C2S0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp44Q8C2S0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.72■■□□□ 1.87
Usp44Q8C2S0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Usp44Q8C2S0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Usp44Q8C2S0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp44Q8C2S0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Usp44Q8C2S0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Usp44Q8C2S0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.71■■□□□ 1.87
Usp44Q8C2S0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp44Q8C2S0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.7■■□□□ 1.87
Usp44Q8C2S0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Usp44Q8C2S0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Usp44Q8C2S0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp44Q8C2S0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp44Q8C2S0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp44Q8C2S0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Usp44Q8C2S0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Usp44Q8C2S0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Usp44Q8C2S0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp44Q8C2S0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp44Q8C2S0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp44Q8C2S0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
Usp44Q8C2S0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp44Q8C2S0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp44Q8C2S0 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.67■■□□□ 1.86
Usp44Q8C2S0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms