Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ska3Q8C263 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.31■■□□□ 1
Ska3Q8C263 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.31■■□□□ 1
Ska3Q8C263 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ska3Q8C263 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ska3Q8C263 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ska3Q8C263 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ska3Q8C263 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ska3Q8C263 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.28■■□□□ 1
Ska3Q8C263 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ska3Q8C263 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ska3Q8C263 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.27■■□□□ 1
Ska3Q8C263 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.27■■□□□ 1
Ska3Q8C263 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ska3Q8C263 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.27■■□□□ 1
Ska3Q8C263 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ska3Q8C263 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ska3Q8C263 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ska3Q8C263 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ska3Q8C263 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ska3Q8C263 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ska3Q8C263 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ska3Q8C263 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ska3Q8C263 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ska3Q8C263 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ska3Q8C263 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ska3Q8C263 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ska3Q8C263 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ska3Q8C263 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ska3Q8C263 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ska3Q8C263 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ska3Q8C263 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ska3Q8C263 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ska3Q8C263 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ska3Q8C263 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ska3Q8C263 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
Ska3Q8C263 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ska3Q8C263 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Ska3Q8C263 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ska3Q8C263 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ska3Q8C263 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ska3Q8C263 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ska3Q8C263 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ska3Q8C263 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ska3Q8C263 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ska3Q8C263 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.19■□□□□ 0.98
Ska3Q8C263 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ska3Q8C263 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ska3Q8C263 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ska3Q8C263 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.18■□□□□ 0.98
Ska3Q8C263 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ska3Q8C263 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.17■□□□□ 0.98
Ska3Q8C263 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ska3Q8C263 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.16■□□□□ 0.98
Ska3Q8C263 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ska3Q8C263 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ska3Q8C263 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ska3Q8C263 Terc-201ENSMUST00000082862 423 ntBASIC21.15■□□□□ 0.98
Ska3Q8C263 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ska3Q8C263 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ska3Q8C263 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Ska3Q8C263 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ska3Q8C263 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ska3Q8C263 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ska3Q8C263 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ska3Q8C263 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ska3Q8C263 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.13■□□□□ 0.97
Ska3Q8C263 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ska3Q8C263 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.13■□□□□ 0.97
Ska3Q8C263 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ska3Q8C263 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ska3Q8C263 Scarna2-201ENSMUST00000157560 414 ntBASIC21.12■□□□□ 0.97
Ska3Q8C263 Gm9806-201ENSMUST00000051080 552 ntBASIC21.12■□□□□ 0.97
Ska3Q8C263 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ska3Q8C263 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ska3Q8C263 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ska3Q8C263 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ska3Q8C263 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms