Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cpne1Q8C166 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpne1Q8C166 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.15■□□□□ 0.98
Cpne1Q8C166 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne1Q8C166 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.14■□□□□ 0.97
Cpne1Q8C166 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.14■□□□□ 0.97
Cpne1Q8C166 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Cpne1Q8C166 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.14■□□□□ 0.97
Cpne1Q8C166 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne1Q8C166 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpne1Q8C166 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne1Q8C166 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpne1Q8C166 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne1Q8C166 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpne1Q8C166 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne1Q8C166 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne1Q8C166 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne1Q8C166 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cpne1Q8C166 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpne1Q8C166 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cpne1Q8C166 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.11■□□□□ 0.97
Cpne1Q8C166 Gm9812-201ENSMUST00000061934 968 ntBASIC21.11■□□□□ 0.97
Cpne1Q8C166 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpne1Q8C166 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne1Q8C166 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne1Q8C166 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.1■□□□□ 0.97
Cpne1Q8C166 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne1Q8C166 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpne1Q8C166 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne1Q8C166 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpne1Q8C166 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Cpne1Q8C166 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpne1Q8C166 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpne1Q8C166 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.07■□□□□ 0.96
Cpne1Q8C166 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne1Q8C166 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne1Q8C166 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cpne1Q8C166 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne1Q8C166 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.05■□□□□ 0.96
Cpne1Q8C166 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne1Q8C166 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne1Q8C166 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne1Q8C166 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cpne1Q8C166 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpne1Q8C166 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.03■□□□□ 0.96
Cpne1Q8C166 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne1Q8C166 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne1Q8C166 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne1Q8C166 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne1Q8C166 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne1Q8C166 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cpne1Q8C166 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne1Q8C166 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne1Q8C166 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpne1Q8C166 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne1Q8C166 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne1Q8C166 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.99■□□□□ 0.95
Cpne1Q8C166 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne1Q8C166 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
Cpne1Q8C166 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms