Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.55■■□□□ 1.36
Trub1Q8C0D0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trub1Q8C0D0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trub1Q8C0D0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trub1Q8C0D0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trub1Q8C0D0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Trub1Q8C0D0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Trub1Q8C0D0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.52■■□□□ 1.36
Trub1Q8C0D0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trub1Q8C0D0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trub1Q8C0D0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trub1Q8C0D0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trub1Q8C0D0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trub1Q8C0D0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Trub1Q8C0D0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trub1Q8C0D0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trub1Q8C0D0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trub1Q8C0D0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Trub1Q8C0D0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.5■■□□□ 1.35
Trub1Q8C0D0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trub1Q8C0D0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trub1Q8C0D0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Trub1Q8C0D0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trub1Q8C0D0 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.49■■□□□ 1.35
Trub1Q8C0D0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trub1Q8C0D0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.48■■□□□ 1.35
Trub1Q8C0D0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trub1Q8C0D0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trub1Q8C0D0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trub1Q8C0D0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trub1Q8C0D0 Mir3960-201ENSMUST00000198213 73 ntBASIC23.47■■□□□ 1.35
Trub1Q8C0D0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trub1Q8C0D0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trub1Q8C0D0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Trub1Q8C0D0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.35
Trub1Q8C0D0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trub1Q8C0D0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Trub1Q8C0D0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trub1Q8C0D0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Trub1Q8C0D0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Trub1Q8C0D0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trub1Q8C0D0 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.43■■□□□ 1.34
Trub1Q8C0D0 Gm9812-201ENSMUST00000061934 968 ntBASIC23.43■■□□□ 1.34
Trub1Q8C0D0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trub1Q8C0D0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trub1Q8C0D0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trub1Q8C0D0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.42■■□□□ 1.34
Trub1Q8C0D0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trub1Q8C0D0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.41■■□□□ 1.34
Trub1Q8C0D0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trub1Q8C0D0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trub1Q8C0D0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.4■■□□□ 1.34
Trub1Q8C0D0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trub1Q8C0D0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.4■■□□□ 1.34
Trub1Q8C0D0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Trub1Q8C0D0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Trub1Q8C0D0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.39■■□□□ 1.33
Trub1Q8C0D0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trub1Q8C0D0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trub1Q8C0D0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.39■■□□□ 1.33
Trub1Q8C0D0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.39■■□□□ 1.33
Trub1Q8C0D0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.38■■□□□ 1.33
Trub1Q8C0D0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Trub1Q8C0D0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.38■■□□□ 1.33
Trub1Q8C0D0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.38■■□□□ 1.33
Trub1Q8C0D0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trub1Q8C0D0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trub1Q8C0D0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.37■■□□□ 1.33
Trub1Q8C0D0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trub1Q8C0D0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trub1Q8C0D0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trub1Q8C0D0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trub1Q8C0D0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.36■■□□□ 1.33
Trub1Q8C0D0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trub1Q8C0D0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trub1Q8C0D0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trub1Q8C0D0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trub1Q8C0D0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trub1Q8C0D0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trub1Q8C0D0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trub1Q8C0D0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trub1Q8C0D0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.33■■□□□ 1.32
Trub1Q8C0D0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trub1Q8C0D0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trub1Q8C0D0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trub1Q8C0D0 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.32■■□□□ 1.32
Trub1Q8C0D0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trub1Q8C0D0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trub1Q8C0D0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trub1Q8C0D0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trub1Q8C0D0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trub1Q8C0D0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trub1Q8C0D0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trub1Q8C0D0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms