Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp43Q8BUM9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp43Q8BUM9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Gm9812-201ENSMUST00000061934 968 ntBASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Usp43Q8BUM9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp43Q8BUM9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Usp43Q8BUM9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp43Q8BUM9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp43Q8BUM9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Usp43Q8BUM9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Usp43Q8BUM9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Usp43Q8BUM9 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.08■■□□□ 1.28
Usp43Q8BUM9 Gm45364-201ENSMUST00000210883 159 ntBASIC23.07■■□□□ 1.28
Usp43Q8BUM9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.07■■□□□ 1.28
Usp43Q8BUM9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Usp43Q8BUM9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Usp43Q8BUM9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp43Q8BUM9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Usp43Q8BUM9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Usp43Q8BUM9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Usp43Q8BUM9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.04■■□□□ 1.28
Usp43Q8BUM9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.04■■□□□ 1.28
Usp43Q8BUM9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.03■■□□□ 1.28
Usp43Q8BUM9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Usp43Q8BUM9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.03■■□□□ 1.28
Usp43Q8BUM9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Usp43Q8BUM9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Usp43Q8BUM9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp43Q8BUM9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Usp43Q8BUM9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Usp43Q8BUM9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Usp43Q8BUM9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Usp43Q8BUM9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp43Q8BUM9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp43Q8BUM9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Usp43Q8BUM9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Usp43Q8BUM9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23■■□□□ 1.27
Usp43Q8BUM9 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.99■■□□□ 1.27
Usp43Q8BUM9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Usp43Q8BUM9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Usp43Q8BUM9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.97■■□□□ 1.27
Usp43Q8BUM9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Usp43Q8BUM9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.97■■□□□ 1.27
Usp43Q8BUM9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Usp43Q8BUM9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.96■■□□□ 1.27
Usp43Q8BUM9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.95■■□□□ 1.26
Usp43Q8BUM9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.95■■□□□ 1.26
Usp43Q8BUM9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Usp43Q8BUM9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.93■■□□□ 1.26
Usp43Q8BUM9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp43Q8BUM9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp43Q8BUM9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Usp43Q8BUM9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp43Q8BUM9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Usp43Q8BUM9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Usp43Q8BUM9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp43Q8BUM9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.91■■□□□ 1.26
Usp43Q8BUM9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp43Q8BUM9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Usp43Q8BUM9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.9■■□□□ 1.26
Usp43Q8BUM9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp43Q8BUM9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.89■■□□□ 1.26
Usp43Q8BUM9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp43Q8BUM9 Terc-201ENSMUST00000082862 423 ntBASIC22.89■■□□□ 1.25
Usp43Q8BUM9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.89■■□□□ 1.25
Usp43Q8BUM9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp43Q8BUM9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp43Q8BUM9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp43Q8BUM9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp43Q8BUM9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms