Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm37136-201ENSMUST00000194368 194 ntBASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cpne3Q8BT60 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.78■■□□□ 1.08
Cpne3Q8BT60 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne3Q8BT60 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne3Q8BT60 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne3Q8BT60 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cpne3Q8BT60 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cpne3Q8BT60 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne3Q8BT60 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cpne3Q8BT60 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cpne3Q8BT60 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.73■■□□□ 1.07
Cpne3Q8BT60 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne3Q8BT60 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.73■■□□□ 1.07
Cpne3Q8BT60 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne3Q8BT60 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne3Q8BT60 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Cpne3Q8BT60 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne3Q8BT60 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne3Q8BT60 Gm8503-201ENSMUST00000118131 455 ntBASIC21.71■■□□□ 1.07
Cpne3Q8BT60 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cpne3Q8BT60 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne3Q8BT60 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne3Q8BT60 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.7■■□□□ 1.07
Cpne3Q8BT60 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.7■■□□□ 1.06
Cpne3Q8BT60 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne3Q8BT60 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Cpne3Q8BT60 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cpne3Q8BT60 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne3Q8BT60 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne3Q8BT60 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne3Q8BT60 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne3Q8BT60 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.69■■□□□ 1.06
Cpne3Q8BT60 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cpne3Q8BT60 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpne3Q8BT60 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpne3Q8BT60 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne3Q8BT60 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.66■■□□□ 1.06
Cpne3Q8BT60 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne3Q8BT60 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpne3Q8BT60 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne3Q8BT60 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.65■■□□□ 1.06
Cpne3Q8BT60 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne3Q8BT60 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne3Q8BT60 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpne3Q8BT60 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cpne3Q8BT60 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne3Q8BT60 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne3Q8BT60 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpne3Q8BT60 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpne3Q8BT60 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpne3Q8BT60 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
Cpne3Q8BT60 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpne3Q8BT60 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpne3Q8BT60 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.62■■□□□ 1.05
Cpne3Q8BT60 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpne3Q8BT60 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.6■■□□□ 1.05
Cpne3Q8BT60 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.6■■□□□ 1.05
Cpne3Q8BT60 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpne3Q8BT60 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms