Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rab11fip4Q8BQP8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.05■■□□□ 1.6
Rab11fip4Q8BQP8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rab11fip4Q8BQP8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Rab11fip4Q8BQP8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Scarna2-201ENSMUST00000157560 414 ntBASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rab11fip4Q8BQP8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.03■■□□□ 1.6
Rab11fip4Q8BQP8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 Gm37136-201ENSMUST00000194368 194 ntBASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 Mir3960-201ENSMUST00000198213 73 ntBASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rab11fip4Q8BQP8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rab11fip4Q8BQP8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.01■■□□□ 1.59
Rab11fip4Q8BQP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rab11fip4Q8BQP8 Gm11687-201ENSMUST00000118911 886 ntBASIC25.01■■□□□ 1.59
Rab11fip4Q8BQP8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Rab11fip4Q8BQP8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rab11fip4Q8BQP8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Rab11fip4Q8BQP8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rab11fip4Q8BQP8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25■■□□□ 1.59
Rab11fip4Q8BQP8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25■■□□□ 1.59
Rab11fip4Q8BQP8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Rab11fip4Q8BQP8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rab11fip4Q8BQP8 Gm9806-201ENSMUST00000051080 552 ntBASIC24.99■■□□□ 1.59
Rab11fip4Q8BQP8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rab11fip4Q8BQP8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rab11fip4Q8BQP8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rab11fip4Q8BQP8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rab11fip4Q8BQP8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.97■■□□□ 1.59
Rab11fip4Q8BQP8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rab11fip4Q8BQP8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rab11fip4Q8BQP8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.97■■□□□ 1.59
Rab11fip4Q8BQP8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rab11fip4Q8BQP8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rab11fip4Q8BQP8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rab11fip4Q8BQP8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Rab11fip4Q8BQP8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab11fip4Q8BQP8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab11fip4Q8BQP8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab11fip4Q8BQP8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab11fip4Q8BQP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rab11fip4Q8BQP8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rab11fip4Q8BQP8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rab11fip4Q8BQP8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 Gm16437-201ENSMUST00000025669 507 ntBASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rab11fip4Q8BQP8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rab11fip4Q8BQP8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Rab11fip4Q8BQP8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rab11fip4Q8BQP8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rab11fip4Q8BQP8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rab11fip4Q8BQP8 Gm45364-201ENSMUST00000210883 159 ntBASIC24.9■■□□□ 1.58
Rab11fip4Q8BQP8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rab11fip4Q8BQP8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rab11fip4Q8BQP8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rab11fip4Q8BQP8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rab11fip4Q8BQP8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rab11fip4Q8BQP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rab11fip4Q8BQP8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rab11fip4Q8BQP8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Rab11fip4Q8BQP8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rab11fip4Q8BQP8 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.87■■□□□ 1.57
Rab11fip4Q8BQP8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rab11fip4Q8BQP8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rab11fip4Q8BQP8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rab11fip4Q8BQP8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.86■■□□□ 1.57
Rab11fip4Q8BQP8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rab11fip4Q8BQP8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.86■■□□□ 1.57
Rab11fip4Q8BQP8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rab11fip4Q8BQP8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rab11fip4Q8BQP8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab11fip4Q8BQP8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab11fip4Q8BQP8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab11fip4Q8BQP8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rab11fip4Q8BQP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Rab11fip4Q8BQP8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rab11fip4Q8BQP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rab11fip4Q8BQP8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.83■■□□□ 1.57
Rab11fip4Q8BQP8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Rab11fip4Q8BQP8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Rab11fip4Q8BQP8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rab11fip4Q8BQP8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Rab11fip4Q8BQP8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.81■■□□□ 1.56
Rab11fip4Q8BQP8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms