Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chrnb3Q8BMN3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chrnb3Q8BMN3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chrnb3Q8BMN3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chrnb3Q8BMN3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chrnb3Q8BMN3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chrnb3Q8BMN3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.25■■□□□ 1.15
Chrnb3Q8BMN3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chrnb3Q8BMN3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chrnb3Q8BMN3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chrnb3Q8BMN3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Chrnb3Q8BMN3 Cap2-205ENSMUST00000225824 1634 ntBASIC22.23■■□□□ 1.15
Chrnb3Q8BMN3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chrnb3Q8BMN3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chrnb3Q8BMN3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chrnb3Q8BMN3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chrnb3Q8BMN3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chrnb3Q8BMN3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chrnb3Q8BMN3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chrnb3Q8BMN3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chrnb3Q8BMN3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Chrnb3Q8BMN3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Chrnb3Q8BMN3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chrnb3Q8BMN3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Chrnb3Q8BMN3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chrnb3Q8BMN3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Chrnb3Q8BMN3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Chrnb3Q8BMN3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Chrnb3Q8BMN3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chrnb3Q8BMN3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chrnb3Q8BMN3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chrnb3Q8BMN3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.14■■□□□ 1.14
Chrnb3Q8BMN3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Chrnb3Q8BMN3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Chrnb3Q8BMN3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chrnb3Q8BMN3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chrnb3Q8BMN3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chrnb3Q8BMN3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chrnb3Q8BMN3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Chrnb3Q8BMN3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chrnb3Q8BMN3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chrnb3Q8BMN3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.09■■□□□ 1.13
Chrnb3Q8BMN3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Chrnb3Q8BMN3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.09■■□□□ 1.13
Chrnb3Q8BMN3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.08■■□□□ 1.13
Chrnb3Q8BMN3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms