Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdh20Q8BIZ0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdh20Q8BIZ0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdh20Q8BIZ0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pcdh20Q8BIZ0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh20Q8BIZ0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh20Q8BIZ0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh20Q8BIZ0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh20Q8BIZ0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh20Q8BIZ0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pcdh20Q8BIZ0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh20Q8BIZ0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh20Q8BIZ0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdh20Q8BIZ0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh20Q8BIZ0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh20Q8BIZ0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdh20Q8BIZ0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh20Q8BIZ0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdh20Q8BIZ0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh20Q8BIZ0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdh20Q8BIZ0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdh20Q8BIZ0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh20Q8BIZ0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh20Q8BIZ0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdh20Q8BIZ0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh20Q8BIZ0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh20Q8BIZ0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcdh20Q8BIZ0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcdh20Q8BIZ0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdh20Q8BIZ0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh20Q8BIZ0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdh20Q8BIZ0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh20Q8BIZ0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh20Q8BIZ0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh20Q8BIZ0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh20Q8BIZ0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Pcdh20Q8BIZ0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh20Q8BIZ0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh20Q8BIZ0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Pcdh20Q8BIZ0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh20Q8BIZ0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh20Q8BIZ0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh20Q8BIZ0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh20Q8BIZ0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh20Q8BIZ0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh20Q8BIZ0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh20Q8BIZ0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh20Q8BIZ0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh20Q8BIZ0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh20Q8BIZ0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh20Q8BIZ0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdh20Q8BIZ0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh20Q8BIZ0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh20Q8BIZ0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh20Q8BIZ0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdh20Q8BIZ0 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh20Q8BIZ0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdh20Q8BIZ0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh20Q8BIZ0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh20Q8BIZ0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdh20Q8BIZ0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh20Q8BIZ0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh20Q8BIZ0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdh20Q8BIZ0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh20Q8BIZ0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh20Q8BIZ0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcdh20Q8BIZ0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh20Q8BIZ0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh20Q8BIZ0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh20Q8BIZ0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms