Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox3Q8BIF2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rbfox3Q8BIF2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox3Q8BIF2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox3Q8BIF2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.29■□□□□ 0.36
Rbfox3Q8BIF2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox3Q8BIF2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Rbfox3Q8BIF2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rbfox3Q8BIF2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbfox3Q8BIF2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Rbfox3Q8BIF2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rbfox3Q8BIF2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.26■□□□□ 0.35
Rbfox3Q8BIF2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Rbfox3Q8BIF2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.24■□□□□ 0.35
Rbfox3Q8BIF2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox3Q8BIF2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rbfox3Q8BIF2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox3Q8BIF2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox3Q8BIF2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox3Q8BIF2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox3Q8BIF2 Gm4799-201ENSMUST00000095396 657 ntBASIC17.21■□□□□ 0.35
Rbfox3Q8BIF2 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.21■□□□□ 0.34
Rbfox3Q8BIF2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox3Q8BIF2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox3Q8BIF2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox3Q8BIF2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox3Q8BIF2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox3Q8BIF2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox3Q8BIF2 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.14■□□□□ 0.33
Rbfox3Q8BIF2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox3Q8BIF2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox3Q8BIF2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms