Protein–RNA interactions for Protein: Q8BHR8

UPF0705 protein C11orf49 homolog, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BHR8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Q8BHR8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Q8BHR8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Q8BHR8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Q8BHR8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Q8BHR8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.62■■□□□ 1.37
Q8BHR8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.62■■□□□ 1.37
Q8BHR8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Q8BHR8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Q8BHR8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.61■■□□□ 1.37
Q8BHR8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.61■■□□□ 1.37
Q8BHR8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Q8BHR8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Q8BHR8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Q8BHR8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
Q8BHR8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Q8BHR8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Q8BHR8 Gm43566-201ENSMUST00000196851 808 ntBASIC23.58■■□□□ 1.37
Q8BHR8 Gm45102-201ENSMUST00000207427 857 ntBASIC23.58■■□□□ 1.37
Q8BHR8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.58■■□□□ 1.37
Q8BHR8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Q8BHR8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Q8BHR8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Q8BHR8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.57■■□□□ 1.36
Q8BHR8 Gm44428-201ENSMUST00000204474 874 ntBASIC23.57■■□□□ 1.36
Q8BHR8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.57■■□□□ 1.36
Q8BHR8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Q8BHR8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Q8BHR8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Q8BHR8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Q8BHR8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Q8BHR8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Q8BHR8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Q8BHR8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Q8BHR8 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.55■■□□□ 1.36
Q8BHR8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Q8BHR8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.55■■□□□ 1.36
Q8BHR8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Q8BHR8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Q8BHR8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Q8BHR8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Q8BHR8 Gm14117-201ENSMUST00000122417 843 ntBASIC23.54■■□□□ 1.36
Q8BHR8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.54■■□□□ 1.36
Q8BHR8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Q8BHR8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Q8BHR8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Q8BHR8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Q8BHR8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Q8BHR8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Q8BHR8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Q8BHR8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.51■■□□□ 1.35
Q8BHR8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Q8BHR8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Q8BHR8 Gm13238-201ENSMUST00000117655 780 ntBASIC23.51■■□□□ 1.35
Q8BHR8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.51■■□□□ 1.35
Q8BHR8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Q8BHR8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Q8BHR8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.5■■□□□ 1.35
Q8BHR8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Q8BHR8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Q8BHR8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.49■■□□□ 1.35
Q8BHR8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.49■■□□□ 1.35
Q8BHR8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Q8BHR8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Q8BHR8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.48■■□□□ 1.35
Q8BHR8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Q8BHR8 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.48■■□□□ 1.35
Q8BHR8 Gm45444-201ENSMUST00000211394 898 ntBASIC23.48■■□□□ 1.35
Q8BHR8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Q8BHR8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Q8BHR8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Q8BHR8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Q8BHR8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
Q8BHR8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Q8BHR8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Q8BHR8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Q8BHR8 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.46■■□□□ 1.35
Q8BHR8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Q8BHR8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Q8BHR8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.45■■□□□ 1.34
Q8BHR8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.45■■□□□ 1.34
Q8BHR8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Q8BHR8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Q8BHR8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Q8BHR8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Q8BHR8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Q8BHR8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Q8BHR8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Q8BHR8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.43■■□□□ 1.34
Q8BHR8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Q8BHR8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Q8BHR8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.42■■□□□ 1.34
Q8BHR8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Q8BHR8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Q8BHR8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 239.4 ms