Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Zc3hc1Q80YV2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3hc1Q80YV2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3hc1Q80YV2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3hc1Q80YV2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3hc1Q80YV2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zc3hc1Q80YV2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Zc3hc1Q80YV2 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.7■□□□□ 0.9
Zc3hc1Q80YV2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Zc3hc1Q80YV2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zc3hc1Q80YV2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Zc3hc1Q80YV2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3hc1Q80YV2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3hc1Q80YV2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Zc3hc1Q80YV2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3hc1Q80YV2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Zc3hc1Q80YV2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zc3hc1Q80YV2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3hc1Q80YV2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.66■□□□□ 0.9
Zc3hc1Q80YV2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3hc1Q80YV2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Zc3hc1Q80YV2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Zc3hc1Q80YV2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Zc3hc1Q80YV2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Zc3hc1Q80YV2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3hc1Q80YV2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zc3hc1Q80YV2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zc3hc1Q80YV2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3hc1Q80YV2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3hc1Q80YV2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3hc1Q80YV2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3hc1Q80YV2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Zc3hc1Q80YV2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Zc3hc1Q80YV2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.61■□□□□ 0.89
Zc3hc1Q80YV2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zc3hc1Q80YV2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zc3hc1Q80YV2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3hc1Q80YV2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3hc1Q80YV2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3hc1Q80YV2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3hc1Q80YV2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Zc3hc1Q80YV2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Zc3hc1Q80YV2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zc3hc1Q80YV2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3hc1Q80YV2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3hc1Q80YV2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3hc1Q80YV2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Zc3hc1Q80YV2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3hc1Q80YV2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Zc3hc1Q80YV2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3hc1Q80YV2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3hc1Q80YV2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3hc1Q80YV2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Zc3hc1Q80YV2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3hc1Q80YV2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3hc1Q80YV2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms