Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.27■■□□□ 1.8
Prpf40bQ80W14 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Prpf40bQ80W14 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.26■■□□□ 1.79
Prpf40bQ80W14 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.26■■□□□ 1.79
Prpf40bQ80W14 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf40bQ80W14 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Prpf40bQ80W14 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf40bQ80W14 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf40bQ80W14 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
Prpf40bQ80W14 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Prpf40bQ80W14 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Prpf40bQ80W14 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.23■■□□□ 1.79
Prpf40bQ80W14 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Prpf40bQ80W14 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf40bQ80W14 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Prpf40bQ80W14 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.21■■□□□ 1.79
Prpf40bQ80W14 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Prpf40bQ80W14 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Prpf40bQ80W14 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Prpf40bQ80W14 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Prpf40bQ80W14 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.19■■□□□ 1.78
Prpf40bQ80W14 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Prpf40bQ80W14 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Prpf40bQ80W14 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf40bQ80W14 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf40bQ80W14 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Prpf40bQ80W14 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Prpf40bQ80W14 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.18■■□□□ 1.78
Prpf40bQ80W14 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf40bQ80W14 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Prpf40bQ80W14 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.15■■□□□ 1.78
Prpf40bQ80W14 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Prpf40bQ80W14 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.14■■□□□ 1.78
Prpf40bQ80W14 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Prpf40bQ80W14 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.13■■□□□ 1.77
Prpf40bQ80W14 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Prpf40bQ80W14 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Prpf40bQ80W14 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.12■■□□□ 1.77
Prpf40bQ80W14 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40bQ80W14 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40bQ80W14 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Prpf40bQ80W14 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Prpf40bQ80W14 Gm9812-201ENSMUST00000061934 968 ntBASIC26.09■■□□□ 1.77
Prpf40bQ80W14 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.08■■□□□ 1.77
Prpf40bQ80W14 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Prpf40bQ80W14 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Prpf40bQ80W14 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Prpf40bQ80W14 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Prpf40bQ80W14 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
Prpf40bQ80W14 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.06■■□□□ 1.76
Prpf40bQ80W14 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Prpf40bQ80W14 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
Prpf40bQ80W14 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.05■■□□□ 1.76
Prpf40bQ80W14 Rps24-207ENSMUST00000224568 714 ntBASIC26.05■■□□□ 1.76
Prpf40bQ80W14 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Prpf40bQ80W14 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Prpf40bQ80W14 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Prpf40bQ80W14 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Prpf40bQ80W14 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Prpf40bQ80W14 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.03■■□□□ 1.76
Prpf40bQ80W14 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40bQ80W14 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40bQ80W14 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40bQ80W14 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf40bQ80W14 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40bQ80W14 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40bQ80W14 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Prpf40bQ80W14 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40bQ80W14 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Prpf40bQ80W14 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.01■■□□□ 1.75
Prpf40bQ80W14 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Prpf40bQ80W14 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Prpf40bQ80W14 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Prpf40bQ80W14 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26■■□□□ 1.75
Prpf40bQ80W14 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26■■□□□ 1.75
Prpf40bQ80W14 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26■■□□□ 1.75
Prpf40bQ80W14 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Prpf40bQ80W14 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Prpf40bQ80W14 Gm15820-201ENSMUST00000201566 728 ntBASIC25.99■■□□□ 1.75
Prpf40bQ80W14 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms