Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3tc2Q80VA5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3tc2Q80VA5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3tc2Q80VA5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sh3tc2Q80VA5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Sh3tc2Q80VA5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Sh3tc2Q80VA5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Gm15546-201ENSMUST00000122095 826 ntBASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Sh3tc2Q80VA5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3tc2Q80VA5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.79■■□□□ 1.56
Sh3tc2Q80VA5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3tc2Q80VA5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3tc2Q80VA5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Sh3tc2Q80VA5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sh3tc2Q80VA5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Sh3tc2Q80VA5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sh3tc2Q80VA5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Sh3tc2Q80VA5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sh3tc2Q80VA5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sh3tc2Q80VA5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Sh3tc2Q80VA5 Terc-201ENSMUST00000082862 423 ntBASIC24.74■■□□□ 1.55
Sh3tc2Q80VA5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Sh3tc2Q80VA5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3tc2Q80VA5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Sh3tc2Q80VA5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.72■■□□□ 1.55
Sh3tc2Q80VA5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
Sh3tc2Q80VA5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sh3tc2Q80VA5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3tc2Q80VA5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Sh3tc2Q80VA5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sh3tc2Q80VA5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Sh3tc2Q80VA5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.67■■□□□ 1.54
Sh3tc2Q80VA5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Sh3tc2Q80VA5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Sh3tc2Q80VA5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3tc2Q80VA5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3tc2Q80VA5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Sh3tc2Q80VA5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3tc2Q80VA5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sh3tc2Q80VA5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sh3tc2Q80VA5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.64■■□□□ 1.54
Sh3tc2Q80VA5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sh3tc2Q80VA5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Sh3tc2Q80VA5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.63■■□□□ 1.53
Sh3tc2Q80VA5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3tc2Q80VA5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Sh3tc2Q80VA5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3tc2Q80VA5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3tc2Q80VA5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3tc2Q80VA5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3tc2Q80VA5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3tc2Q80VA5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms