Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21Q78T54 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21Q78T54 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21Q78T54 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21Q78T54 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21Q78T54 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vma21Q78T54 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vma21Q78T54 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Vma21Q78T54 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21Q78T54 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21Q78T54 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vma21Q78T54 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vma21Q78T54 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.4■□□□□ 0.54
Vma21Q78T54 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.4■□□□□ 0.54
Vma21Q78T54 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.4■□□□□ 0.54
Vma21Q78T54 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vma21Q78T54 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Vma21Q78T54 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vma21Q78T54 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vma21Q78T54 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21Q78T54 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21Q78T54 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.38■□□□□ 0.53
Vma21Q78T54 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21Q78T54 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.38■□□□□ 0.53
Vma21Q78T54 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21Q78T54 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21Q78T54 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Vma21Q78T54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21Q78T54 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.37■□□□□ 0.53
Vma21Q78T54 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21Q78T54 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.36■□□□□ 0.53
Vma21Q78T54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vma21Q78T54 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21Q78T54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21Q78T54 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vma21Q78T54 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.36■□□□□ 0.53
Vma21Q78T54 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21Q78T54 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21Q78T54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21Q78T54 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vma21Q78T54 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21Q78T54 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vma21Q78T54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21Q78T54 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21Q78T54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.33■□□□□ 0.53
Vma21Q78T54 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vma21Q78T54 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.33■□□□□ 0.52
Vma21Q78T54 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21Q78T54 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vma21Q78T54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21Q78T54 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21Q78T54 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21Q78T54 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21Q78T54 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vma21Q78T54 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vma21Q78T54 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vma21Q78T54 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vma21Q78T54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21Q78T54 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.3■□□□□ 0.52
Vma21Q78T54 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.3■□□□□ 0.52
Vma21Q78T54 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21Q78T54 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21Q78T54 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21Q78T54 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.29■□□□□ 0.52
Vma21Q78T54 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21Q78T54 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.29■□□□□ 0.52
Vma21Q78T54 Gm37136-201ENSMUST00000194368 194 ntBASIC18.29■□□□□ 0.52
Vma21Q78T54 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.29■□□□□ 0.52
Vma21Q78T54 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Vma21Q78T54 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vma21Q78T54 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Vma21Q78T54 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vma21Q78T54 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vma21Q78T54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vma21Q78T54 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.27■□□□□ 0.52
Vma21Q78T54 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.27■□□□□ 0.52
Vma21Q78T54 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Vma21Q78T54 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vma21Q78T54 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.27■□□□□ 0.52
Vma21Q78T54 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vma21Q78T54 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vma21Q78T54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vma21Q78T54 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
Vma21Q78T54 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21Q78T54 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21Q78T54 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21Q78T54 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.25■□□□□ 0.51
Vma21Q78T54 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21Q78T54 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21Q78T54 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.25■□□□□ 0.51
Vma21Q78T54 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21Q78T54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Vma21Q78T54 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vma21Q78T54 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms