Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cspg5Q71M36 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cspg5Q71M36 Gm22567-201ENSMUST00000175542 342 ntBASIC23.39■■□□□ 1.33
Cspg5Q71M36 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.39■■□□□ 1.33
Cspg5Q71M36 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cspg5Q71M36 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cspg5Q71M36 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Cspg5Q71M36 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cspg5Q71M36 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg5Q71M36 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg5Q71M36 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.37■■□□□ 1.33
Cspg5Q71M36 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg5Q71M36 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cspg5Q71M36 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cspg5Q71M36 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cspg5Q71M36 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cspg5Q71M36 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cspg5Q71M36 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cspg5Q71M36 Gm15039-201ENSMUST00000118914 875 ntBASIC23.35■■□□□ 1.33
Cspg5Q71M36 Gm10420-201ENSMUST00000121713 882 ntBASIC23.35■■□□□ 1.33
Cspg5Q71M36 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.35■■□□□ 1.33
Cspg5Q71M36 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cspg5Q71M36 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Cspg5Q71M36 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cspg5Q71M36 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Cspg5Q71M36 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.33■■□□□ 1.33
Cspg5Q71M36 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.33■■□□□ 1.33
Cspg5Q71M36 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.33■■□□□ 1.33
Cspg5Q71M36 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.33■■□□□ 1.33
Cspg5Q71M36 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Cspg5Q71M36 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cspg5Q71M36 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cspg5Q71M36 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Cspg5Q71M36 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cspg5Q71M36 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cspg5Q71M36 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cspg5Q71M36 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cspg5Q71M36 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cspg5Q71M36 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.31■■□□□ 1.32
Cspg5Q71M36 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.31■■□□□ 1.32
Cspg5Q71M36 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cspg5Q71M36 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cspg5Q71M36 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cspg5Q71M36 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cspg5Q71M36 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cspg5Q71M36 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
Cspg5Q71M36 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cspg5Q71M36 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
Cspg5Q71M36 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cspg5Q71M36 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cspg5Q71M36 Gm5812-201ENSMUST00000061073 957 ntBASIC23.27■■□□□ 1.32
Cspg5Q71M36 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cspg5Q71M36 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cspg5Q71M36 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cspg5Q71M36 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Cspg5Q71M36 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cspg5Q71M36 Gm9812-201ENSMUST00000061934 968 ntBASIC23.26■■□□□ 1.31
Cspg5Q71M36 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cspg5Q71M36 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cspg5Q71M36 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cspg5Q71M36 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cspg5Q71M36 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cspg5Q71M36 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cspg5Q71M36 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cspg5Q71M36 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.24■■□□□ 1.31
Cspg5Q71M36 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cspg5Q71M36 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Cspg5Q71M36 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Cspg5Q71M36 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Cspg5Q71M36 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cspg5Q71M36 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cspg5Q71M36 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cspg5Q71M36 Gm5921-201ENSMUST00000075898 882 ntBASIC23.22■■□□□ 1.31
Cspg5Q71M36 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cspg5Q71M36 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cspg5Q71M36 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cspg5Q71M36 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cspg5Q71M36 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.2■■□□□ 1.3
Cspg5Q71M36 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cspg5Q71M36 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cspg5Q71M36 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cspg5Q71M36 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Cspg5Q71M36 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.19■■□□□ 1.3
Cspg5Q71M36 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Cspg5Q71M36 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cspg5Q71M36 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cspg5Q71M36 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cspg5Q71M36 Terc-201ENSMUST00000082862 423 ntBASIC23.18■■□□□ 1.3
Cspg5Q71M36 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cspg5Q71M36 Gm15546-201ENSMUST00000122095 826 ntBASIC23.17■■□□□ 1.3
Cspg5Q71M36 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cspg5Q71M36 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cspg5Q71M36 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.16■■□□□ 1.3
Cspg5Q71M36 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.16■■□□□ 1.3
Cspg5Q71M36 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms