Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cachd1Q6PDJ1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Cachd1Q6PDJ1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Cachd1Q6PDJ1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.27■■□□□ 1.32
Cachd1Q6PDJ1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cachd1Q6PDJ1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Cachd1Q6PDJ1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cachd1Q6PDJ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.26■■□□□ 1.31
Cachd1Q6PDJ1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cachd1Q6PDJ1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cachd1Q6PDJ1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cachd1Q6PDJ1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cachd1Q6PDJ1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cachd1Q6PDJ1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cachd1Q6PDJ1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cachd1Q6PDJ1 Gm9847-201ENSMUST00000052528 599 ntBASIC23.23■■□□□ 1.31
Cachd1Q6PDJ1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cachd1Q6PDJ1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cachd1Q6PDJ1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cachd1Q6PDJ1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cachd1Q6PDJ1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cachd1Q6PDJ1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cachd1Q6PDJ1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.19■■□□□ 1.3
Cachd1Q6PDJ1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cachd1Q6PDJ1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Cachd1Q6PDJ1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.18■■□□□ 1.3
Cachd1Q6PDJ1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.18■■□□□ 1.3
Cachd1Q6PDJ1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cachd1Q6PDJ1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cachd1Q6PDJ1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.17■■□□□ 1.3
Cachd1Q6PDJ1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cachd1Q6PDJ1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cachd1Q6PDJ1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cachd1Q6PDJ1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cachd1Q6PDJ1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.16■■□□□ 1.3
Cachd1Q6PDJ1 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.16■■□□□ 1.3
Cachd1Q6PDJ1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cachd1Q6PDJ1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cachd1Q6PDJ1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cachd1Q6PDJ1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cachd1Q6PDJ1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Cachd1Q6PDJ1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cachd1Q6PDJ1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.13■■□□□ 1.29
Cachd1Q6PDJ1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cachd1Q6PDJ1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cachd1Q6PDJ1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cachd1Q6PDJ1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cachd1Q6PDJ1 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.11■■□□□ 1.29
Cachd1Q6PDJ1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cachd1Q6PDJ1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Gm21956-201ENSMUST00000179946 522 ntBASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Gm9812-201ENSMUST00000061934 968 ntBASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Cachd1Q6PDJ1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cachd1Q6PDJ1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.08■■□□□ 1.29
Cachd1Q6PDJ1 Gm18284-201ENSMUST00000172604 624 ntBASIC23.08■■□□□ 1.29
Cachd1Q6PDJ1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.08■■□□□ 1.29
Cachd1Q6PDJ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Cachd1Q6PDJ1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cachd1Q6PDJ1 Gm12821-201ENSMUST00000120022 600 ntBASIC23.06■■□□□ 1.28
Cachd1Q6PDJ1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cachd1Q6PDJ1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cachd1Q6PDJ1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cachd1Q6PDJ1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cachd1Q6PDJ1 Gm37136-201ENSMUST00000194368 194 ntBASIC23.05■■□□□ 1.28
Cachd1Q6PDJ1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cachd1Q6PDJ1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cachd1Q6PDJ1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cachd1Q6PDJ1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cachd1Q6PDJ1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cachd1Q6PDJ1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Cachd1Q6PDJ1 Zxda-201ENSMUST00000117281 2621 ntBASIC23.04■■□□□ 1.28
Cachd1Q6PDJ1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cachd1Q6PDJ1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.03■■□□□ 1.28
Cachd1Q6PDJ1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.03■■□□□ 1.28
Cachd1Q6PDJ1 Gm10232-201ENSMUST00000089221 720 ntBASIC23.03■■□□□ 1.28
Cachd1Q6PDJ1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cachd1Q6PDJ1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cachd1Q6PDJ1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cachd1Q6PDJ1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cachd1Q6PDJ1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cachd1Q6PDJ1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cachd1Q6PDJ1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cachd1Q6PDJ1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cachd1Q6PDJ1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Cachd1Q6PDJ1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cachd1Q6PDJ1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms