Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Smarcc2Q6PDG5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26,54■■□□□ 1,84
Smarcc2Q6PDG5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26,54■■□□□ 1,84
Smarcc2Q6PDG5 Gm6311-201ENSMUST00000073790 878 ntBASIC26,54■■□□□ 1,84
Smarcc2Q6PDG5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Smarcc2Q6PDG5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Smarcc2Q6PDG5 Il17rd-202ENSMUST00000223942 2186 ntBASIC26,53■■□□□ 1,84
Smarcc2Q6PDG5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26,53■■□□□ 1,84
Smarcc2Q6PDG5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26,53■■□□□ 1,84
Smarcc2Q6PDG5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26,52■■□□□ 1,84
Smarcc2Q6PDG5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26,52■■□□□ 1,84
Smarcc2Q6PDG5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Gm4799-201ENSMUST00000095396 657 ntBASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Smarcc2Q6PDG5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smarcc2Q6PDG5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Smarcc2Q6PDG5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smarcc2Q6PDG5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26,5■■□□□ 1,83
Smarcc2Q6PDG5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smarcc2Q6PDG5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26,49■■□□□ 1,83
Smarcc2Q6PDG5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smarcc2Q6PDG5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26,48■■□□□ 1,83
Smarcc2Q6PDG5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smarcc2Q6PDG5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smarcc2Q6PDG5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26,47■■□□□ 1,83
Smarcc2Q6PDG5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smarcc2Q6PDG5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smarcc2Q6PDG5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smarcc2Q6PDG5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smarcc2Q6PDG5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26,46■■□□□ 1,83
Smarcc2Q6PDG5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26,46■■□□□ 1,83
Smarcc2Q6PDG5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smarcc2Q6PDG5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26,45■■□□□ 1,82
Smarcc2Q6PDG5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Smarcc2Q6PDG5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26,45■■□□□ 1,82
Smarcc2Q6PDG5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26,44■■□□□ 1,82
Smarcc2Q6PDG5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Smarcc2Q6PDG5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26,44■■□□□ 1,82
Smarcc2Q6PDG5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26,43■■□□□ 1,82
Smarcc2Q6PDG5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26,43■■□□□ 1,82
Smarcc2Q6PDG5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Smarcc2Q6PDG5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Smarcc2Q6PDG5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Smarcc2Q6PDG5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smarcc2Q6PDG5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26,41■■□□□ 1,82
Smarcc2Q6PDG5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26,41■■□□□ 1,82
Smarcc2Q6PDG5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smarcc2Q6PDG5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Smarcc2Q6PDG5 Mir3960-201ENSMUST00000198213 73 ntBASIC26,4■■□□□ 1,82
Smarcc2Q6PDG5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26,39■■□□□ 1,81
Smarcc2Q6PDG5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 AC154454.1-201ENSMUST00000225253 216 ntBASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Smarcc2Q6PDG5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Smarcc2Q6PDG5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26,37■■□□□ 1,81
Smarcc2Q6PDG5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26,37■■□□□ 1,81
Smarcc2Q6PDG5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Smarcc2Q6PDG5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Smarcc2Q6PDG5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Smarcc2Q6PDG5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Smarcc2Q6PDG5 Gm13889-201ENSMUST00000099689 1386 ntBASIC26,34■■□□□ 1,81
Smarcc2Q6PDG5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Smarcc2Q6PDG5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26,33■■□□□ 1,81
Smarcc2Q6PDG5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Gm11175-201ENSMUST00000116172 543 ntBASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Pkd1-207ENSMUST00000228550 1050 ntBASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Smarcc2Q6PDG5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Gm45364-201ENSMUST00000210883 159 ntBASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26,31■■□□□ 1,8
Smarcc2Q6PDG5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms