Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usf2Q64705 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usf2Q64705 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usf2Q64705 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usf2Q64705 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Usf2Q64705 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usf2Q64705 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Usf2Q64705 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Usf2Q64705 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.04■□□□□ 0.64
Usf2Q64705 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usf2Q64705 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usf2Q64705 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usf2Q64705 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.03■□□□□ 0.64
Usf2Q64705 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usf2Q64705 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.03■□□□□ 0.64
Usf2Q64705 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usf2Q64705 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usf2Q64705 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Usf2Q64705 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.01■□□□□ 0.63
Usf2Q64705 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usf2Q64705 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.01■□□□□ 0.63
Usf2Q64705 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usf2Q64705 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usf2Q64705 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usf2Q64705 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usf2Q64705 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.99■□□□□ 0.63
Usf2Q64705 Gm6821-201ENSMUST00000107540 542 ntBASIC18.99■□□□□ 0.63
Usf2Q64705 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Usf2Q64705 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usf2Q64705 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Usf2Q64705 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usf2Q64705 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Usf2Q64705 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Usf2Q64705 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Usf2Q64705 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usf2Q64705 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usf2Q64705 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Usf2Q64705 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Usf2Q64705 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Usf2Q64705 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.96■□□□□ 0.63
Usf2Q64705 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usf2Q64705 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Usf2Q64705 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Usf2Q64705 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usf2Q64705 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usf2Q64705 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Usf2Q64705 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usf2Q64705 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usf2Q64705 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usf2Q64705 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usf2Q64705 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usf2Q64705 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usf2Q64705 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usf2Q64705 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.94■□□□□ 0.62
Usf2Q64705 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usf2Q64705 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usf2Q64705 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.93■□□□□ 0.62
Usf2Q64705 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usf2Q64705 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usf2Q64705 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Usf2Q64705 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.93■□□□□ 0.62
Usf2Q64705 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usf2Q64705 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usf2Q64705 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usf2Q64705 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usf2Q64705 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.91■□□□□ 0.62
Usf2Q64705 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usf2Q64705 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usf2Q64705 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usf2Q64705 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.91■□□□□ 0.62
Usf2Q64705 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usf2Q64705 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.9■□□□□ 0.62
Usf2Q64705 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usf2Q64705 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.9■□□□□ 0.62
Usf2Q64705 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.9■□□□□ 0.62
Usf2Q64705 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usf2Q64705 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usf2Q64705 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usf2Q64705 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Usf2Q64705 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usf2Q64705 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usf2Q64705 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usf2Q64705 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usf2Q64705 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Usf2Q64705 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Usf2Q64705 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usf2Q64705 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usf2Q64705 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usf2Q64705 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usf2Q64705 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.87■□□□□ 0.61
Usf2Q64705 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usf2Q64705 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usf2Q64705 Gm8503-201ENSMUST00000118131 455 ntBASIC18.87■□□□□ 0.61
Usf2Q64705 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usf2Q64705 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms