Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Commd3Q63829 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Commd3Q63829 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Commd3Q63829 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Commd3Q63829 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Commd3Q63829 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Commd3Q63829 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Commd3Q63829 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Commd3Q63829 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 Gm8109-201ENSMUST00000194076 746 ntBASIC18.9■□□□□ 0.62
Commd3Q63829 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Commd3Q63829 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.9■□□□□ 0.62
Commd3Q63829 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Commd3Q63829 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Commd3Q63829 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Commd3Q63829 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Commd3Q63829 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Commd3Q63829 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Commd3Q63829 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Commd3Q63829 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Commd3Q63829 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Commd3Q63829 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Commd3Q63829 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Commd3Q63829 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Commd3Q63829 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.84■□□□□ 0.61
Commd3Q63829 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Commd3Q63829 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.83■□□□□ 0.6
Commd3Q63829 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Commd3Q63829 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd3Q63829 Gm16148-201ENSMUST00000119653 893 ntBASIC18.82■□□□□ 0.6
Commd3Q63829 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd3Q63829 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Commd3Q63829 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd3Q63829 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Commd3Q63829 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.81■□□□□ 0.6
Commd3Q63829 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.81■□□□□ 0.6
Commd3Q63829 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd3Q63829 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.81■□□□□ 0.6
Commd3Q63829 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd3Q63829 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.8■□□□□ 0.6
Commd3Q63829 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.8■□□□□ 0.6
Commd3Q63829 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd3Q63829 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Commd3Q63829 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Commd3Q63829 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Commd3Q63829 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Commd3Q63829 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Commd3Q63829 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Commd3Q63829 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Commd3Q63829 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Commd3Q63829 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Commd3Q63829 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Commd3Q63829 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Commd3Q63829 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Commd3Q63829 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd3Q63829 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Commd3Q63829 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd3Q63829 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd3Q63829 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Commd3Q63829 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Commd3Q63829 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Commd3Q63829 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.75■□□□□ 0.59
Commd3Q63829 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Commd3Q63829 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd3Q63829 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms