Protein–RNA interactions for Protein: Q62521

Zic3, Zinc finger protein ZIC 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic3Q62521 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic3Q62521 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic3Q62521 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Zic3Q62521 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zic3Q62521 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Zic3Q62521 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zic3Q62521 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Zic3Q62521 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zic3Q62521 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Zic3Q62521 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic3Q62521 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic3Q62521 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic3Q62521 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Zic3Q62521 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.03■□□□□ 0.64
Zic3Q62521 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Zic3Q62521 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zic3Q62521 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.02■□□□□ 0.64
Zic3Q62521 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.02■□□□□ 0.64
Zic3Q62521 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Zic3Q62521 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.01■□□□□ 0.63
Zic3Q62521 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Zic3Q62521 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Zic3Q62521 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.01■□□□□ 0.63
Zic3Q62521 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Zic3Q62521 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zic3Q62521 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zic3Q62521 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19■□□□□ 0.63
Zic3Q62521 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Zic3Q62521 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zic3Q62521 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19■□□□□ 0.63
Zic3Q62521 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Zic3Q62521 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zic3Q62521 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zic3Q62521 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Zic3Q62521 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zic3Q62521 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zic3Q62521 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zic3Q62521 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zic3Q62521 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Zic3Q62521 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.97■□□□□ 0.63
Zic3Q62521 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Zic3Q62521 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.97■□□□□ 0.63
Zic3Q62521 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zic3Q62521 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zic3Q62521 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zic3Q62521 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zic3Q62521 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.96■□□□□ 0.63
Zic3Q62521 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zic3Q62521 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.95■□□□□ 0.62
Zic3Q62521 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.95■□□□□ 0.62
Zic3Q62521 Gm6311-201ENSMUST00000073790 878 ntBASIC18.95■□□□□ 0.62
Zic3Q62521 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zic3Q62521 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zic3Q62521 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zic3Q62521 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zic3Q62521 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Zic3Q62521 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zic3Q62521 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zic3Q62521 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Zic3Q62521 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.94■□□□□ 0.62
Zic3Q62521 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.94■□□□□ 0.62
Zic3Q62521 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zic3Q62521 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zic3Q62521 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zic3Q62521 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zic3Q62521 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zic3Q62521 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zic3Q62521 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.92■□□□□ 0.62
Zic3Q62521 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zic3Q62521 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zic3Q62521 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.91■□□□□ 0.62
Zic3Q62521 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.91■□□□□ 0.62
Zic3Q62521 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zic3Q62521 Terc-201ENSMUST00000082862 423 ntBASIC18.91■□□□□ 0.62
Zic3Q62521 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zic3Q62521 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zic3Q62521 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Zic3Q62521 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Zic3Q62521 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zic3Q62521 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Zic3Q62521 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.89■□□□□ 0.61
Zic3Q62521 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zic3Q62521 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Zic3Q62521 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Zic3Q62521 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zic3Q62521 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zic3Q62521 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zic3Q62521 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zic3Q62521 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zic3Q62521 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms