Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tff3Q62395 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff3Q62395 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tff3Q62395 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.78■□□□□ 0.76
Tff3Q62395 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.78■□□□□ 0.76
Tff3Q62395 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.78■□□□□ 0.76
Tff3Q62395 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff3Q62395 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff3Q62395 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.77■□□□□ 0.76
Tff3Q62395 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.77■□□□□ 0.76
Tff3Q62395 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tff3Q62395 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tff3Q62395 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tff3Q62395 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tff3Q62395 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tff3Q62395 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.76■□□□□ 0.75
Tff3Q62395 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tff3Q62395 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff3Q62395 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff3Q62395 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff3Q62395 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.75■□□□□ 0.75
Tff3Q62395 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tff3Q62395 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tff3Q62395 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tff3Q62395 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tff3Q62395 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tff3Q62395 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.73■□□□□ 0.75
Tff3Q62395 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.73■□□□□ 0.75
Tff3Q62395 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tff3Q62395 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tff3Q62395 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tff3Q62395 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tff3Q62395 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.72■□□□□ 0.75
Tff3Q62395 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tff3Q62395 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tff3Q62395 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.71■□□□□ 0.75
Tff3Q62395 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.71■□□□□ 0.75
Tff3Q62395 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tff3Q62395 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tff3Q62395 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tff3Q62395 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tff3Q62395 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff3Q62395 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.69■□□□□ 0.74
Tff3Q62395 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tff3Q62395 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff3Q62395 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tff3Q62395 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff3Q62395 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff3Q62395 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tff3Q62395 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff3Q62395 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff3Q62395 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Tff3Q62395 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff3Q62395 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff3Q62395 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff3Q62395 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff3Q62395 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff3Q62395 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff3Q62395 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff3Q62395 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.65■□□□□ 0.74
Tff3Q62395 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.65■□□□□ 0.74
Tff3Q62395 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tff3Q62395 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.64■□□□□ 0.73
Tff3Q62395 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tff3Q62395 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tff3Q62395 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff3Q62395 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tff3Q62395 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff3Q62395 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tff3Q62395 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.63■□□□□ 0.73
Tff3Q62395 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tff3Q62395 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tff3Q62395 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.63■□□□□ 0.73
Tff3Q62395 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tff3Q62395 Gm44428-201ENSMUST00000204474 874 ntBASIC19.62■□□□□ 0.73
Tff3Q62395 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tff3Q62395 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.62■□□□□ 0.73
Tff3Q62395 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tff3Q62395 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tff3Q62395 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tff3Q62395 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tff3Q62395 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tff3Q62395 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tff3Q62395 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tff3Q62395 Gm10420-201ENSMUST00000121713 882 ntBASIC19.6■□□□□ 0.73
Tff3Q62395 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.6■□□□□ 0.73
Tff3Q62395 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tff3Q62395 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tff3Q62395 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tff3Q62395 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tff3Q62395 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tff3Q62395 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tff3Q62395 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms