Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd47Q61735 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd47Q61735 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd47Q61735 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cd47Q61735 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd47Q61735 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd47Q61735 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd47Q61735 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd47Q61735 Gm37136-201ENSMUST00000194368 194 ntBASIC20.55■□□□□ 0.88
Cd47Q61735 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Cd47Q61735 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd47Q61735 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd47Q61735 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd47Q61735 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd47Q61735 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd47Q61735 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd47Q61735 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd47Q61735 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd47Q61735 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cd47Q61735 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cd47Q61735 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.51■□□□□ 0.87
Cd47Q61735 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cd47Q61735 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd47Q61735 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd47Q61735 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd47Q61735 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd47Q61735 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd47Q61735 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd47Q61735 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd47Q61735 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd47Q61735 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.49■□□□□ 0.87
Cd47Q61735 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd47Q61735 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cd47Q61735 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.48■□□□□ 0.87
Cd47Q61735 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cd47Q61735 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.48■□□□□ 0.87
Cd47Q61735 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd47Q61735 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cd47Q61735 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd47Q61735 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Gm8503-201ENSMUST00000118131 455 ntBASIC20.47■□□□□ 0.87
Cd47Q61735 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd47Q61735 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd47Q61735 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd47Q61735 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.46■□□□□ 0.87
Cd47Q61735 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd47Q61735 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd47Q61735 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cd47Q61735 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd47Q61735 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Cd47Q61735 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd47Q61735 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd47Q61735 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd47Q61735 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd47Q61735 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd47Q61735 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd47Q61735 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd47Q61735 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd47Q61735 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd47Q61735 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cd47Q61735 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd47Q61735 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cd47Q61735 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cd47Q61735 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.42■□□□□ 0.86
Cd47Q61735 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd47Q61735 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.41■□□□□ 0.86
Cd47Q61735 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cd47Q61735 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd47Q61735 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd47Q61735 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd47Q61735 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Cd47Q61735 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd47Q61735 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.4■□□□□ 0.86
Cd47Q61735 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd47Q61735 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd47Q61735 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cd47Q61735 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.4■□□□□ 0.86
Cd47Q61735 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd47Q61735 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.39■□□□□ 0.86
Cd47Q61735 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd47Q61735 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd47Q61735 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.39■□□□□ 0.85
Cd47Q61735 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd47Q61735 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd47Q61735 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd47Q61735 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.38■□□□□ 0.85
Cd47Q61735 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.38■□□□□ 0.85
Cd47Q61735 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cd47Q61735 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cd47Q61735 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd47Q61735 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd47Q61735 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd47Q61735 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms