Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd53Q61451 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cd53Q61451 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.79■□□□□ 0.92
Cd53Q61451 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cd53Q61451 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd53Q61451 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cd53Q61451 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd53Q61451 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd53Q61451 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd53Q61451 Gm11175-201ENSMUST00000116172 543 ntBASIC20.77■□□□□ 0.92
Cd53Q61451 Mir6538-201ENSMUST00000183713 110 ntBASIC20.77■□□□□ 0.92
Cd53Q61451 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd53Q61451 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cd53Q61451 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cd53Q61451 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.76■□□□□ 0.91
Cd53Q61451 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd53Q61451 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd53Q61451 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cd53Q61451 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd53Q61451 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd53Q61451 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd53Q61451 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Cd53Q61451 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd53Q61451 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd53Q61451 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd53Q61451 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.73■□□□□ 0.91
Cd53Q61451 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd53Q61451 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd53Q61451 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd53Q61451 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd53Q61451 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd53Q61451 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cd53Q61451 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cd53Q61451 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd53Q61451 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.71■□□□□ 0.91
Cd53Q61451 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cd53Q61451 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd53Q61451 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Cd53Q61451 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd53Q61451 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cd53Q61451 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cd53Q61451 Cap2-205ENSMUST00000225824 1634 ntBASIC20.69■□□□□ 0.9
Cd53Q61451 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Cd53Q61451 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cd53Q61451 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd53Q61451 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cd53Q61451 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cd53Q61451 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cd53Q61451 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd53Q61451 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.68■□□□□ 0.9
Cd53Q61451 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd53Q61451 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cd53Q61451 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd53Q61451 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd53Q61451 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd53Q61451 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd53Q61451 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cd53Q61451 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cd53Q61451 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd53Q61451 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd53Q61451 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd53Q61451 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cd53Q61451 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd53Q61451 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd53Q61451 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cd53Q61451 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cd53Q61451 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.65■□□□□ 0.9
Cd53Q61451 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.64■□□□□ 0.89
Cd53Q61451 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.64■□□□□ 0.89
Cd53Q61451 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.64■□□□□ 0.89
Cd53Q61451 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd53Q61451 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd53Q61451 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd53Q61451 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd53Q61451 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.63■□□□□ 0.89
Cd53Q61451 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.62■□□□□ 0.89
Cd53Q61451 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cd53Q61451 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd53Q61451 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd53Q61451 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
Cd53Q61451 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cd53Q61451 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Cd53Q61451 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd53Q61451 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd53Q61451 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd53Q61451 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd53Q61451 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.59■□□□□ 0.89
Cd53Q61451 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cd53Q61451 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd53Q61451 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms