Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Foxf1Q61080 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Foxf1Q61080 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxf1Q61080 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxf1Q61080 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Foxf1Q61080 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxf1Q61080 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxf1Q61080 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxf1Q61080 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxf1Q61080 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Foxf1Q61080 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.03■□□□□ 0.64
Foxf1Q61080 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxf1Q61080 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Foxf1Q61080 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Foxf1Q61080 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Foxf1Q61080 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Foxf1Q61080 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Foxf1Q61080 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Foxf1Q61080 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 Gm11599-201ENSMUST00000118720 878 ntBASIC19.01■□□□□ 0.63
Foxf1Q61080 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.01■□□□□ 0.63
Foxf1Q61080 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxf1Q61080 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19■□□□□ 0.63
Foxf1Q61080 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxf1Q61080 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Foxf1Q61080 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxf1Q61080 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxf1Q61080 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxf1Q61080 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.99■□□□□ 0.63
Foxf1Q61080 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Foxf1Q61080 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxf1Q61080 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Foxf1Q61080 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxf1Q61080 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxf1Q61080 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Foxf1Q61080 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Foxf1Q61080 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.96■□□□□ 0.63
Foxf1Q61080 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Foxf1Q61080 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Foxf1Q61080 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Foxf1Q61080 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Foxf1Q61080 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxf1Q61080 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxf1Q61080 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Foxf1Q61080 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.95■□□□□ 0.62
Foxf1Q61080 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Foxf1Q61080 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxf1Q61080 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.94■□□□□ 0.62
Foxf1Q61080 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxf1Q61080 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxf1Q61080 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxf1Q61080 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Foxf1Q61080 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxf1Q61080 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxf1Q61080 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Foxf1Q61080 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxf1Q61080 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxf1Q61080 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Foxf1Q61080 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Foxf1Q61080 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Foxf1Q61080 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.9■□□□□ 0.62
Foxf1Q61080 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxf1Q61080 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.9■□□□□ 0.62
Foxf1Q61080 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Foxf1Q61080 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Foxf1Q61080 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Gm4799-201ENSMUST00000095396 657 ntBASIC18.89■□□□□ 0.61
Foxf1Q61080 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.89■□□□□ 0.61
Foxf1Q61080 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxf1Q61080 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Foxf1Q61080 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Foxf1Q61080 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.88■□□□□ 0.61
Foxf1Q61080 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxf1Q61080 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms