Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Trav6d-4Q5R1I0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6d-4Q5R1I0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6d-4Q5R1I0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6d-4Q5R1I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav6d-4Q5R1I0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav6d-4Q5R1I0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Trav6d-4Q5R1I0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6d-4Q5R1I0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav6d-4Q5R1I0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6d-4Q5R1I0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6d-4Q5R1I0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6d-4Q5R1I0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6d-4Q5R1I0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav6d-4Q5R1I0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6d-4Q5R1I0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-4Q5R1I0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Gm27502-201ENSMUST00000183495 199 ntBASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-4Q5R1I0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.08■□□□□ 0.65
Trav6d-4Q5R1I0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Trav6d-4Q5R1I0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6d-4Q5R1I0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6d-4Q5R1I0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6d-4Q5R1I0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6d-4Q5R1I0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6d-4Q5R1I0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav6d-4Q5R1I0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6d-4Q5R1I0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6d-4Q5R1I0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav6d-4Q5R1I0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav6d-4Q5R1I0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6d-4Q5R1I0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6d-4Q5R1I0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6d-4Q5R1I0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6d-4Q5R1I0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav6d-4Q5R1I0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.01■□□□□ 0.63
Trav6d-4Q5R1I0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms