Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav3-3Q5R1C3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-3Q5R1C3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-3Q5R1C3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-3Q5R1C3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-3Q5R1C3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-3Q5R1C3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav3-3Q5R1C3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav3-3Q5R1C3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav3-3Q5R1C3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav3-3Q5R1C3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav3-3Q5R1C3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav3-3Q5R1C3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav3-3Q5R1C3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav3-3Q5R1C3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav3-3Q5R1C3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-3Q5R1C3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3-3Q5R1C3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3-3Q5R1C3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav3-3Q5R1C3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3-3Q5R1C3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3-3Q5R1C3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-3Q5R1C3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-3Q5R1C3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-3Q5R1C3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-3Q5R1C3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-3Q5R1C3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav3-3Q5R1C3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav3-3Q5R1C3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav3-3Q5R1C3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav3-3Q5R1C3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav3-3Q5R1C3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav3-3Q5R1C3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3-3Q5R1C3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav3-3Q5R1C3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav3-3Q5R1C3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3-3Q5R1C3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3-3Q5R1C3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-3Q5R1C3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-3Q5R1C3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3-3Q5R1C3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3-3Q5R1C3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav3-3Q5R1C3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.85■□□□□ 0.29
Trav3-3Q5R1C3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-3Q5R1C3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms