Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26,64■■□□□ 1,85
Rc3h1Q4VGL6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26,63■■□□□ 1,85
Rc3h1Q4VGL6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Rc3h1Q4VGL6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Rc3h1Q4VGL6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26,61■■□□□ 1,85
Rc3h1Q4VGL6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Rc3h1Q4VGL6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Rc3h1Q4VGL6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Rc3h1Q4VGL6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26,6■■□□□ 1,85
Rc3h1Q4VGL6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26,59■■□□□ 1,85
Rc3h1Q4VGL6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26,59■■□□□ 1,85
Rc3h1Q4VGL6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Rc3h1Q4VGL6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26,59■■□□□ 1,85
Rc3h1Q4VGL6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Rc3h1Q4VGL6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26,58■■□□□ 1,85
Rc3h1Q4VGL6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Rc3h1Q4VGL6 Gm14523-201ENSMUST00000117260 558 ntBASIC26,58■■□□□ 1,85
Rc3h1Q4VGL6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Rc3h1Q4VGL6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Rc3h1Q4VGL6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26,56■■□□□ 1,84
Rc3h1Q4VGL6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Rc3h1Q4VGL6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Rc3h1Q4VGL6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Rc3h1Q4VGL6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Rc3h1Q4VGL6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Rc3h1Q4VGL6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26,54■■□□□ 1,84
Rc3h1Q4VGL6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26,54■■□□□ 1,84
Rc3h1Q4VGL6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26,54■■□□□ 1,84
Rc3h1Q4VGL6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Gm7332-201ENSMUST00000118351 454 ntBASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Rc3h1Q4VGL6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26,52■■□□□ 1,84
Rc3h1Q4VGL6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26,52■■□□□ 1,84
Rc3h1Q4VGL6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Rc3h1Q4VGL6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26,51■■□□□ 1,84
Rc3h1Q4VGL6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Rc3h1Q4VGL6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Rc3h1Q4VGL6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26,5■■□□□ 1,83
Rc3h1Q4VGL6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26,5■■□□□ 1,83
Rc3h1Q4VGL6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26,5■■□□□ 1,83
Rc3h1Q4VGL6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Rc3h1Q4VGL6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26,49■■□□□ 1,83
Rc3h1Q4VGL6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Rc3h1Q4VGL6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26,48■■□□□ 1,83
Rc3h1Q4VGL6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Rc3h1Q4VGL6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26,48■■□□□ 1,83
Rc3h1Q4VGL6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26,47■■□□□ 1,83
Rc3h1Q4VGL6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26,47■■□□□ 1,83
Rc3h1Q4VGL6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Rc3h1Q4VGL6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26,46■■□□□ 1,83
Rc3h1Q4VGL6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Rc3h1Q4VGL6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26,45■■□□□ 1,82
Rc3h1Q4VGL6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26,44■■□□□ 1,82
Rc3h1Q4VGL6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26,44■■□□□ 1,82
Rc3h1Q4VGL6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Rc3h1Q4VGL6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Rc3h1Q4VGL6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Rc3h1Q4VGL6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26,43■■□□□ 1,82
Rc3h1Q4VGL6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26,43■■□□□ 1,82
Rc3h1Q4VGL6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Rc3h1Q4VGL6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Rc3h1Q4VGL6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Rc3h1Q4VGL6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26,42■■□□□ 1,82
Rc3h1Q4VGL6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26,41■■□□□ 1,82
Rc3h1Q4VGL6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26,41■■□□□ 1,82
Rc3h1Q4VGL6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26,41■■□□□ 1,82
Rc3h1Q4VGL6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Rc3h1Q4VGL6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26,4■■□□□ 1,82
Rc3h1Q4VGL6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26,4■■□□□ 1,82
Rc3h1Q4VGL6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26,4■■□□□ 1,82
Rc3h1Q4VGL6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Rc3h1Q4VGL6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26,39■■□□□ 1,82
Rc3h1Q4VGL6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26,39■■□□□ 1,82
Rc3h1Q4VGL6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Rc3h1Q4VGL6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Rc3h1Q4VGL6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Rc3h1Q4VGL6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26,38■■□□□ 1,81
Rc3h1Q4VGL6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26,38■■□□□ 1,81
Rc3h1Q4VGL6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26,37■■□□□ 1,81
Rc3h1Q4VGL6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26,37■■□□□ 1,81
Rc3h1Q4VGL6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Rc3h1Q4VGL6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26,37■■□□□ 1,81
Rc3h1Q4VGL6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26,36■■□□□ 1,81
Rc3h1Q4VGL6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26,36■■□□□ 1,81
Rc3h1Q4VGL6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Rc3h1Q4VGL6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26,36■■□□□ 1,81
Retrieved 100 of 76,532 protein–RNA pairs in 18,1 ms