Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fndc4Q3TR08 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fndc4Q3TR08 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fndc4Q3TR08 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fndc4Q3TR08 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fndc4Q3TR08 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fndc4Q3TR08 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fndc4Q3TR08 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fndc4Q3TR08 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Fndc4Q3TR08 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fndc4Q3TR08 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fndc4Q3TR08 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.18■□□□□ 0.66
Fndc4Q3TR08 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Fndc4Q3TR08 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Gm6821-201ENSMUST00000107540 542 ntBASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Fndc4Q3TR08 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fndc4Q3TR08 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.16■□□□□ 0.66
Fndc4Q3TR08 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Fndc4Q3TR08 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fndc4Q3TR08 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fndc4Q3TR08 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fndc4Q3TR08 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fndc4Q3TR08 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fndc4Q3TR08 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fndc4Q3TR08 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fndc4Q3TR08 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.14■□□□□ 0.65
Fndc4Q3TR08 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Fndc4Q3TR08 Gm8503-201ENSMUST00000118131 455 ntBASIC19.13■□□□□ 0.65
Fndc4Q3TR08 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Fndc4Q3TR08 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Fndc4Q3TR08 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fndc4Q3TR08 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Fndc4Q3TR08 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Fndc4Q3TR08 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fndc4Q3TR08 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Fndc4Q3TR08 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fndc4Q3TR08 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.11■□□□□ 0.65
Fndc4Q3TR08 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fndc4Q3TR08 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Fndc4Q3TR08 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Fndc4Q3TR08 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Fndc4Q3TR08 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.09■□□□□ 0.65
Fndc4Q3TR08 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fndc4Q3TR08 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Fndc4Q3TR08 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Fndc4Q3TR08 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Fndc4Q3TR08 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Fndc4Q3TR08 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.08■□□□□ 0.64
Fndc4Q3TR08 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Fndc4Q3TR08 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Fndc4Q3TR08 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fndc4Q3TR08 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Fndc4Q3TR08 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.06■□□□□ 0.64
Fndc4Q3TR08 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.06■□□□□ 0.64
Fndc4Q3TR08 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Fndc4Q3TR08 Particl-201ENSMUST00000205370 1560 ntBASIC19.06■□□□□ 0.64
Fndc4Q3TR08 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fndc4Q3TR08 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.05■□□□□ 0.64
Fndc4Q3TR08 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fndc4Q3TR08 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fndc4Q3TR08 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Fndc4Q3TR08 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Fndc4Q3TR08 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms