Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Nhej1Q3KNJ2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Nhej1Q3KNJ2 Gm37136-201ENSMUST00000194368 194 ntBASIC24.19■■□□□ 1.46
Nhej1Q3KNJ2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Nhej1Q3KNJ2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nhej1Q3KNJ2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nhej1Q3KNJ2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.18■■□□□ 1.46
Nhej1Q3KNJ2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Nhej1Q3KNJ2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.17■■□□□ 1.46
Nhej1Q3KNJ2 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.17■■□□□ 1.46
Nhej1Q3KNJ2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nhej1Q3KNJ2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nhej1Q3KNJ2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nhej1Q3KNJ2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.16■■□□□ 1.46
Nhej1Q3KNJ2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Nhej1Q3KNJ2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.15■■□□□ 1.46
Nhej1Q3KNJ2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Nhej1Q3KNJ2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Nhej1Q3KNJ2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Nhej1Q3KNJ2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Nhej1Q3KNJ2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nhej1Q3KNJ2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.13■■□□□ 1.45
Nhej1Q3KNJ2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.13■■□□□ 1.45
Nhej1Q3KNJ2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.13■■□□□ 1.45
Nhej1Q3KNJ2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
Nhej1Q3KNJ2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
Nhej1Q3KNJ2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.12■■□□□ 1.45
Nhej1Q3KNJ2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nhej1Q3KNJ2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.12■■□□□ 1.45
Nhej1Q3KNJ2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nhej1Q3KNJ2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Nhej1Q3KNJ2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Nhej1Q3KNJ2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
Nhej1Q3KNJ2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Nhej1Q3KNJ2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nhej1Q3KNJ2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Nhej1Q3KNJ2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nhej1Q3KNJ2 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.09■■□□□ 1.45
Nhej1Q3KNJ2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.09■■□□□ 1.45
Nhej1Q3KNJ2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.09■■□□□ 1.45
Nhej1Q3KNJ2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.09■■□□□ 1.45
Nhej1Q3KNJ2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nhej1Q3KNJ2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Nhej1Q3KNJ2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Nhej1Q3KNJ2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Nhej1Q3KNJ2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Nhej1Q3KNJ2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Nhej1Q3KNJ2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.07■■□□□ 1.44
Nhej1Q3KNJ2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nhej1Q3KNJ2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Nhej1Q3KNJ2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nhej1Q3KNJ2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nhej1Q3KNJ2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nhej1Q3KNJ2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Nhej1Q3KNJ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.05■■□□□ 1.44
Nhej1Q3KNJ2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Nhej1Q3KNJ2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nhej1Q3KNJ2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.03■■□□□ 1.44
Nhej1Q3KNJ2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Nhej1Q3KNJ2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nhej1Q3KNJ2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nhej1Q3KNJ2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Nhej1Q3KNJ2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nhej1Q3KNJ2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nhej1Q3KNJ2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Nhej1Q3KNJ2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nhej1Q3KNJ2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nhej1Q3KNJ2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nhej1Q3KNJ2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24■■□□□ 1.43
Nhej1Q3KNJ2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nhej1Q3KNJ2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nhej1Q3KNJ2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nhej1Q3KNJ2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nhej1Q3KNJ2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nhej1Q3KNJ2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nhej1Q3KNJ2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nhej1Q3KNJ2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nhej1Q3KNJ2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nhej1Q3KNJ2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
Nhej1Q3KNJ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.96■■□□□ 1.43
Nhej1Q3KNJ2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Nhej1Q3KNJ2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Nhej1Q3KNJ2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Nhej1Q3KNJ2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Nhej1Q3KNJ2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Nhej1Q3KNJ2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nhej1Q3KNJ2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nhej1Q3KNJ2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Nhej1Q3KNJ2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms