Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.51■■□□□ 1.19
SgcgP82348 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SgcgP82348 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.51■■□□□ 1.19
SgcgP82348 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.51■■□□□ 1.19
SgcgP82348 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SgcgP82348 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.5■■□□□ 1.19
SgcgP82348 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.5■■□□□ 1.19
SgcgP82348 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SgcgP82348 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SgcgP82348 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SgcgP82348 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SgcgP82348 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SgcgP82348 Gm14523-201ENSMUST00000117260 558 ntBASIC22.48■■□□□ 1.19
SgcgP82348 Gm7332-201ENSMUST00000118351 454 ntBASIC22.48■■□□□ 1.19
SgcgP82348 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SgcgP82348 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SgcgP82348 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SgcgP82348 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SgcgP82348 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SgcgP82348 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.46■■□□□ 1.19
SgcgP82348 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SgcgP82348 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SgcgP82348 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SgcgP82348 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SgcgP82348 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.45■■□□□ 1.18
SgcgP82348 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SgcgP82348 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcgP82348 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcgP82348 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SgcgP82348 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcgP82348 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SgcgP82348 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SgcgP82348 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SgcgP82348 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SgcgP82348 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SgcgP82348 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SgcgP82348 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SgcgP82348 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SgcgP82348 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.42■■□□□ 1.18
SgcgP82348 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SgcgP82348 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SgcgP82348 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SgcgP82348 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SgcgP82348 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SgcgP82348 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SgcgP82348 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.41■■□□□ 1.18
SgcgP82348 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SgcgP82348 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SgcgP82348 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.4■■□□□ 1.18
SgcgP82348 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SgcgP82348 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
SgcgP82348 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.39■■□□□ 1.17
SgcgP82348 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SgcgP82348 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SgcgP82348 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
SgcgP82348 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SgcgP82348 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.37■■□□□ 1.17
SgcgP82348 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.37■■□□□ 1.17
SgcgP82348 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SgcgP82348 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SgcgP82348 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SgcgP82348 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SgcgP82348 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SgcgP82348 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SgcgP82348 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.34■■□□□ 1.17
SgcgP82348 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SgcgP82348 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SgcgP82348 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SgcgP82348 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SgcgP82348 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.33■■□□□ 1.17
SgcgP82348 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SgcgP82348 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.33■■□□□ 1.17
SgcgP82348 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SgcgP82348 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SgcgP82348 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SgcgP82348 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SgcgP82348 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SgcgP82348 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SgcgP82348 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SgcgP82348 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SgcgP82348 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SgcgP82348 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SgcgP82348 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.31■■□□□ 1.16
SgcgP82348 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SgcgP82348 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
SgcgP82348 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SgcgP82348 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SgcgP82348 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SgcgP82348 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SgcgP82348 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SgcgP82348 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SgcgP82348 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SgcgP82348 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SgcgP82348 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SgcgP82348 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms