Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.45■□□□□ 0.7
Usp9xP70398 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp9xP70398 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp9xP70398 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.45■□□□□ 0.7
Usp9xP70398 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp9xP70398 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp9xP70398 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp9xP70398 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp9xP70398 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp9xP70398 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp9xP70398 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp9xP70398 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp9xP70398 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp9xP70398 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp9xP70398 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Usp9xP70398 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp9xP70398 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp9xP70398 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp9xP70398 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp9xP70398 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp9xP70398 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp9xP70398 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp9xP70398 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp9xP70398 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.39■□□□□ 0.69
Usp9xP70398 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp9xP70398 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.39■□□□□ 0.69
Usp9xP70398 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp9xP70398 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp9xP70398 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp9xP70398 Terc-201ENSMUST00000082862 423 ntBASIC19.38■□□□□ 0.69
Usp9xP70398 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp9xP70398 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp9xP70398 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp9xP70398 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp9xP70398 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp9xP70398 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp9xP70398 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp9xP70398 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp9xP70398 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp9xP70398 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp9xP70398 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp9xP70398 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp9xP70398 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp9xP70398 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.34■□□□□ 0.69
Usp9xP70398 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp9xP70398 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp9xP70398 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp9xP70398 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp9xP70398 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp9xP70398 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Usp9xP70398 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp9xP70398 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Usp9xP70398 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp9xP70398 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp9xP70398 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp9xP70398 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.33■□□□□ 0.68
Usp9xP70398 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp9xP70398 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp9xP70398 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp9xP70398 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp9xP70398 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp9xP70398 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.32■□□□□ 0.68
Usp9xP70398 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp9xP70398 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp9xP70398 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp9xP70398 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp9xP70398 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.3■□□□□ 0.68
Usp9xP70398 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp9xP70398 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp9xP70398 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp9xP70398 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp9xP70398 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp9xP70398 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp9xP70398 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.28■□□□□ 0.68
Usp9xP70398 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp9xP70398 Gm21956-201ENSMUST00000179946 522 ntBASIC19.27■□□□□ 0.67
Usp9xP70398 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.27■□□□□ 0.67
Usp9xP70398 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp9xP70398 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp9xP70398 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.26■□□□□ 0.67
Usp9xP70398 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Usp9xP70398 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp9xP70398 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp9xP70398 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp9xP70398 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.25■□□□□ 0.67
Usp9xP70398 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp9xP70398 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp9xP70398 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp9xP70398 Gm10232-201ENSMUST00000089221 720 ntBASIC19.24■□□□□ 0.67
Usp9xP70398 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp9xP70398 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp9xP70398 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp9xP70398 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp9xP70398 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp9xP70398 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp9xP70398 Gm44428-201ENSMUST00000204474 874 ntBASIC19.23■□□□□ 0.67
Usp9xP70398 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.23■□□□□ 0.67
Usp9xP70398 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp9xP70398 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
Usp9xP70398 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms