Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim4P70271 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim4P70271 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.76■□□□□ 0.59
Pdlim4P70271 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim4P70271 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pdlim4P70271 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim4P70271 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.75■□□□□ 0.59
Pdlim4P70271 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim4P70271 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim4P70271 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim4P70271 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pdlim4P70271 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim4P70271 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim4P70271 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim4P70271 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.73■□□□□ 0.59
Pdlim4P70271 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pdlim4P70271 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim4P70271 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim4P70271 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim4P70271 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.72■□□□□ 0.59
Pdlim4P70271 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim4P70271 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim4P70271 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.72■□□□□ 0.59
Pdlim4P70271 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim4P70271 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pdlim4P70271 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.71■□□□□ 0.59
Pdlim4P70271 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim4P70271 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pdlim4P70271 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim4P70271 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pdlim4P70271 Gm45364-201ENSMUST00000210883 159 ntBASIC18.69■□□□□ 0.58
Pdlim4P70271 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim4P70271 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim4P70271 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.69■□□□□ 0.58
Pdlim4P70271 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pdlim4P70271 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim4P70271 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim4P70271 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim4P70271 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim4P70271 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim4P70271 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.67■□□□□ 0.58
Pdlim4P70271 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim4P70271 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pdlim4P70271 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim4P70271 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim4P70271 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim4P70271 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim4P70271 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim4P70271 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim4P70271 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim4P70271 Gm9812-201ENSMUST00000061934 968 ntBASIC18.65■□□□□ 0.58
Pdlim4P70271 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim4P70271 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim4P70271 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim4P70271 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim4P70271 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim4P70271 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim4P70271 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.63■□□□□ 0.57
Pdlim4P70271 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.63■□□□□ 0.57
Pdlim4P70271 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim4P70271 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim4P70271 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pdlim4P70271 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.63■□□□□ 0.57
Pdlim4P70271 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim4P70271 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim4P70271 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdlim4P70271 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdlim4P70271 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim4P70271 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim4P70271 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim4P70271 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.6■□□□□ 0.57
Pdlim4P70271 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim4P70271 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim4P70271 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim4P70271 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pdlim4P70271 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim4P70271 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
Pdlim4P70271 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim4P70271 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdlim4P70271 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.59■□□□□ 0.57
Pdlim4P70271 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pdlim4P70271 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim4P70271 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim4P70271 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim4P70271 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim4P70271 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim4P70271 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim4P70271 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim4P70271 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.58■□□□□ 0.56
Pdlim4P70271 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms