Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.5■□□□□ 0.71
Uba52P62984 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.5■□□□□ 0.71
Uba52P62984 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Uba52P62984 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Uba52P62984 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Uba52P62984 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Uba52P62984 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Uba52P62984 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Uba52P62984 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Uba52P62984 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Uba52P62984 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Uba52P62984 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Uba52P62984 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Uba52P62984 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Uba52P62984 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Uba52P62984 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Uba52P62984 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.48■□□□□ 0.71
Uba52P62984 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Uba52P62984 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Uba52P62984 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Uba52P62984 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Uba52P62984 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.47■□□□□ 0.71
Uba52P62984 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Uba52P62984 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Uba52P62984 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Uba52P62984 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba52P62984 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Uba52P62984 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba52P62984 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba52P62984 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba52P62984 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Uba52P62984 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba52P62984 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Uba52P62984 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Uba52P62984 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba52P62984 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba52P62984 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.42■□□□□ 0.7
Uba52P62984 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Uba52P62984 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.42■□□□□ 0.7
Uba52P62984 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba52P62984 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Uba52P62984 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba52P62984 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
Uba52P62984 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Uba52P62984 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Uba52P62984 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.4■□□□□ 0.7
Uba52P62984 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba52P62984 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Uba52P62984 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Uba52P62984 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Uba52P62984 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Uba52P62984 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Uba52P62984 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba52P62984 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba52P62984 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Uba52P62984 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uba52P62984 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uba52P62984 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.39■□□□□ 0.69
Uba52P62984 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba52P62984 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uba52P62984 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.38■□□□□ 0.69
Uba52P62984 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Uba52P62984 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Uba52P62984 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Uba52P62984 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Uba52P62984 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba52P62984 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Uba52P62984 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Uba52P62984 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.37■□□□□ 0.69
Uba52P62984 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
Uba52P62984 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.36■□□□□ 0.69
Uba52P62984 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.36■□□□□ 0.69
Uba52P62984 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Uba52P62984 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Uba52P62984 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba52P62984 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.35■□□□□ 0.69
Uba52P62984 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Uba52P62984 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Uba52P62984 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba52P62984 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
Uba52P62984 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.35■□□□□ 0.69
Uba52P62984 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba52P62984 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba52P62984 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Uba52P62984 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Uba52P62984 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba52P62984 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba52P62984 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Uba52P62984 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Uba52P62984 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba52P62984 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms