Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lsm5P62322 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lsm5P62322 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lsm5P62322 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lsm5P62322 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm5P62322 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm5P62322 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm5P62322 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm5P62322 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Lsm5P62322 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lsm5P62322 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm5P62322 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm5P62322 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm5P62322 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm5P62322 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm5P62322 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm5P62322 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lsm5P62322 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm5P62322 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm5P62322 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm5P62322 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm5P62322 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm5P62322 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm5P62322 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.9■□□□□ 0.62
Lsm5P62322 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.9■□□□□ 0.62
Lsm5P62322 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Gm8109-201ENSMUST00000194076 746 ntBASIC18.9■□□□□ 0.62
Lsm5P62322 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm5P62322 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm5P62322 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm5P62322 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lsm5P62322 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lsm5P62322 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm5P62322 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm5P62322 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lsm5P62322 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.88■□□□□ 0.61
Lsm5P62322 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm5P62322 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.88■□□□□ 0.61
Lsm5P62322 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lsm5P62322 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm5P62322 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm5P62322 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm5P62322 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm5P62322 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.86■□□□□ 0.61
Lsm5P62322 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm5P62322 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Lsm5P62322 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lsm5P62322 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm5P62322 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm5P62322 Gm16148-201ENSMUST00000119653 893 ntBASIC18.85■□□□□ 0.61
Lsm5P62322 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm5P62322 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
Lsm5P62322 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm5P62322 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm5P62322 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lsm5P62322 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Lsm5P62322 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.83■□□□□ 0.61
Lsm5P62322 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm5P62322 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm5P62322 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.83■□□□□ 0.6
Lsm5P62322 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm5P62322 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm5P62322 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm5P62322 Particl-201ENSMUST00000205370 1560 ntBASIC18.82■□□□□ 0.6
Lsm5P62322 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lsm5P62322 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm5P62322 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm5P62322 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm5P62322 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm5P62322 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lsm5P62322 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm5P62322 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.8■□□□□ 0.6
Lsm5P62322 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm5P62322 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lsm5P62322 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Lsm5P62322 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm5P62322 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm5P62322 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm5P62322 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.79■□□□□ 0.6
Lsm5P62322 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm5P62322 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lsm5P62322 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lsm5P62322 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms