Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Tpm1P58771 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tpm1P58771 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tpm1P58771 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Tpm1P58771 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Tpm1P58771 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tpm1P58771 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.23■■□□□ 1.63
Tpm1P58771 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tpm1P58771 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Tpm1P58771 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tpm1P58771 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Tpm1P58771 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tpm1P58771 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Tpm1P58771 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tpm1P58771 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.22■■□□□ 1.63
Tpm1P58771 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Tpm1P58771 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Tpm1P58771 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Tpm1P58771 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Tpm1P58771 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Tpm1P58771 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tpm1P58771 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.2■■□□□ 1.62
Tpm1P58771 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tpm1P58771 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Tpm1P58771 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.2■■□□□ 1.62
Tpm1P58771 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tpm1P58771 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tpm1P58771 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tpm1P58771 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tpm1P58771 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tpm1P58771 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Tpm1P58771 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.18■■□□□ 1.62
Tpm1P58771 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tpm1P58771 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.17■■□□□ 1.62
Tpm1P58771 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Tpm1P58771 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tpm1P58771 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Tpm1P58771 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tpm1P58771 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tpm1P58771 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Tpm1P58771 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Tpm1P58771 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
Tpm1P58771 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tpm1P58771 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tpm1P58771 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tpm1P58771 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tpm1P58771 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Tpm1P58771 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tpm1P58771 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Tpm1P58771 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Tpm1P58771 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Tpm1P58771 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
Tpm1P58771 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tpm1P58771 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Tpm1P58771 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tpm1P58771 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Tpm1P58771 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.12■■□□□ 1.61
Tpm1P58771 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tpm1P58771 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tpm1P58771 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Tpm1P58771 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Tpm1P58771 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.09■■□□□ 1.61
Tpm1P58771 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Tpm1P58771 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tpm1P58771 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.09■■□□□ 1.61
Tpm1P58771 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Tpm1P58771 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Tpm1P58771 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Tpm1P58771 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tpm1P58771 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tpm1P58771 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Tpm1P58771 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Tpm1P58771 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tpm1P58771 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tpm1P58771 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tpm1P58771 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.07■■□□□ 1.6
Tpm1P58771 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.06■■□□□ 1.6
Tpm1P58771 Gm45855-201ENSMUST00000212546 880 ntBASIC25.06■■□□□ 1.6
Tpm1P58771 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Tpm1P58771 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tpm1P58771 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tpm1P58771 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tpm1P58771 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tpm1P58771 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
Tpm1P58771 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Tpm1P58771 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Tpm1P58771 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25.05■■□□□ 1.6
Tpm1P58771 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tpm1P58771 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tpm1P58771 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tpm1P58771 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Tpm1P58771 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tpm1P58771 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tpm1P58771 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Tpm1P58771 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.02■■□□□ 1.6
Tpm1P58771 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Tpm1P58771 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Tpm1P58771 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.02■■□□□ 1.6
Tpm1P58771 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tpm1P58771 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms