Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rph3aP47708 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rph3aP47708 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rph3aP47708 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rph3aP47708 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.75■■□□□ 1.07
Rph3aP47708 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.75■■□□□ 1.07
Rph3aP47708 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rph3aP47708 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.75■■□□□ 1.07
Rph3aP47708 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rph3aP47708 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rph3aP47708 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.74■■□□□ 1.07
Rph3aP47708 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rph3aP47708 Gm9812-201ENSMUST00000061934 968 ntBASIC21.73■■□□□ 1.07
Rph3aP47708 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rph3aP47708 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rph3aP47708 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rph3aP47708 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rph3aP47708 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rph3aP47708 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rph3aP47708 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rph3aP47708 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rph3aP47708 Gm45364-201ENSMUST00000210883 159 ntBASIC21.71■■□□□ 1.07
Rph3aP47708 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rph3aP47708 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rph3aP47708 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rph3aP47708 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.7■■□□□ 1.06
Rph3aP47708 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rph3aP47708 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rph3aP47708 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rph3aP47708 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rph3aP47708 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.69■■□□□ 1.06
Rph3aP47708 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rph3aP47708 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rph3aP47708 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rph3aP47708 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.68■■□□□ 1.06
Rph3aP47708 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rph3aP47708 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rph3aP47708 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rph3aP47708 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.67■■□□□ 1.06
Rph3aP47708 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.67■■□□□ 1.06
Rph3aP47708 Gm6311-201ENSMUST00000073790 878 ntBASIC21.67■■□□□ 1.06
Rph3aP47708 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rph3aP47708 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rph3aP47708 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.66■■□□□ 1.06
Rph3aP47708 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.66■■□□□ 1.06
Rph3aP47708 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.66■■□□□ 1.06
Rph3aP47708 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rph3aP47708 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rph3aP47708 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rph3aP47708 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.65■■□□□ 1.06
Rph3aP47708 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rph3aP47708 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.65■■□□□ 1.06
Rph3aP47708 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rph3aP47708 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.65■■□□□ 1.06
Rph3aP47708 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rph3aP47708 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.64■■□□□ 1.05
Rph3aP47708 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rph3aP47708 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rph3aP47708 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.64■■□□□ 1.05
Rph3aP47708 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rph3aP47708 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rph3aP47708 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rph3aP47708 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rph3aP47708 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rph3aP47708 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rph3aP47708 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Rph3aP47708 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rph3aP47708 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rph3aP47708 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rph3aP47708 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rph3aP47708 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rph3aP47708 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rph3aP47708 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rph3aP47708 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rph3aP47708 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rph3aP47708 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rph3aP47708 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rph3aP47708 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rph3aP47708 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rph3aP47708 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rph3aP47708 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.58■■□□□ 1.05
Rph3aP47708 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rph3aP47708 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rph3aP47708 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rph3aP47708 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rph3aP47708 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Rph3aP47708 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rph3aP47708 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.55■■□□□ 1.04
Rph3aP47708 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rph3aP47708 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms