Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn1aP39689 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.78■□□□□ 0.6
Cdkn1aP39689 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Gm14523-201ENSMUST00000117260 558 ntBASIC18.77■□□□□ 0.6
Cdkn1aP39689 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.77■□□□□ 0.6
Cdkn1aP39689 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn1aP39689 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn1aP39689 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Gm7332-201ENSMUST00000118351 454 ntBASIC18.76■□□□□ 0.59
Cdkn1aP39689 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdkn1aP39689 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdkn1aP39689 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.68■□□□□ 0.58
Cdkn1aP39689 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Gm44428-201ENSMUST00000204474 874 ntBASIC18.66■□□□□ 0.58
Cdkn1aP39689 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn1aP39689 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms