Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl6P27784 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl6P27784 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Ccl6P27784 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccl6P27784 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl6P27784 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccl6P27784 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl6P27784 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl6P27784 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl6P27784 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl6P27784 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl6P27784 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl6P27784 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.58■□□□□ 0.4
Ccl6P27784 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccl6P27784 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl6P27784 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl6P27784 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl6P27784 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl6P27784 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.56■□□□□ 0.4
Ccl6P27784 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl6P27784 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl6P27784 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl6P27784 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl6P27784 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccl6P27784 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccl6P27784 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl6P27784 Gm11599-201ENSMUST00000118720 878 ntBASIC17.54■□□□□ 0.4
Ccl6P27784 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccl6P27784 Gm4799-201ENSMUST00000095396 657 ntBASIC17.54■□□□□ 0.4
Ccl6P27784 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl6P27784 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl6P27784 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ccl6P27784 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ccl6P27784 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl6P27784 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl6P27784 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl6P27784 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl6P27784 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccl6P27784 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccl6P27784 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl6P27784 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl6P27784 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccl6P27784 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl6P27784 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccl6P27784 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.5■□□□□ 0.39
Ccl6P27784 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl6P27784 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl6P27784 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl6P27784 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccl6P27784 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl6P27784 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl6P27784 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccl6P27784 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccl6P27784 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccl6P27784 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl6P27784 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl6P27784 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl6P27784 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl6P27784 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccl6P27784 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl6P27784 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl6P27784 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl6P27784 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.45■□□□□ 0.38
Ccl6P27784 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccl6P27784 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.45■□□□□ 0.38
Ccl6P27784 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl6P27784 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccl6P27784 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl6P27784 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccl6P27784 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl6P27784 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl6P27784 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl6P27784 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl6P27784 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl6P27784 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl6P27784 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.43■□□□□ 0.38
Ccl6P27784 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl6P27784 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl6P27784 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.41■□□□□ 0.38
Ccl6P27784 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl6P27784 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl6P27784 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccl6P27784 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms