Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf9P20334 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf9P20334 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf9P20334 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf9P20334 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf9P20334 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf9P20334 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf9P20334 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Gm5812-201ENSMUST00000061073 957 ntBASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
Tnfrsf9P20334 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf9P20334 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf9P20334 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf9P20334 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf9P20334 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf9P20334 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.17■□□□□ 0.5
Tnfrsf9P20334 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Gm37136-201ENSMUST00000194368 194 ntBASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf9P20334 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf9P20334 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf9P20334 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf9P20334 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Tnfrsf9P20334 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf9P20334 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf9P20334 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf9P20334 Gm10420-201ENSMUST00000121713 882 ntBASIC18.11■□□□□ 0.49
Tnfrsf9P20334 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.11■□□□□ 0.49
Tnfrsf9P20334 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf9P20334 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tnfrsf9P20334 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf9P20334 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf9P20334 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf9P20334 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf9P20334 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf9P20334 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.09■□□□□ 0.49
Tnfrsf9P20334 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tnfrsf9P20334 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf9P20334 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf9P20334 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf9P20334 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms