Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl1P10146 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccl1P10146 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl1P10146 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl1P10146 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl1P10146 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl1P10146 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl1P10146 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccl1P10146 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl1P10146 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl1P10146 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl1P10146 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl1P10146 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccl1P10146 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccl1P10146 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl1P10146 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl1P10146 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl1P10146 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl1P10146 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl1P10146 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl1P10146 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl1P10146 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccl1P10146 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl1P10146 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccl1P10146 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl1P10146 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl1P10146 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl1P10146 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl1P10146 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl1P10146 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.59■□□□□ 0.41
Ccl1P10146 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.59■□□□□ 0.41
Ccl1P10146 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl1P10146 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccl1P10146 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.58■□□□□ 0.41
Ccl1P10146 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.58■□□□□ 0.41
Ccl1P10146 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Ccl1P10146 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl1P10146 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccl1P10146 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl1P10146 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl1P10146 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccl1P10146 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.55■□□□□ 0.4
Ccl1P10146 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl1P10146 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl1P10146 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl1P10146 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl1P10146 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl1P10146 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl1P10146 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Ccl1P10146 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl1P10146 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl1P10146 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccl1P10146 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccl1P10146 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccl1P10146 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccl1P10146 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl1P10146 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccl1P10146 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl1P10146 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl1P10146 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Ccl1P10146 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl1P10146 Particl-201ENSMUST00000205370 1560 ntBASIC17.52■□□□□ 0.39
Ccl1P10146 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccl1P10146 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccl1P10146 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccl1P10146 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl1P10146 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.51■□□□□ 0.39
Ccl1P10146 Gm8109-201ENSMUST00000194076 746 ntBASIC17.51■□□□□ 0.39
Ccl1P10146 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl1P10146 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl1P10146 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl1P10146 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl1P10146 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl1P10146 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccl1P10146 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl1P10146 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl1P10146 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl1P10146 Gm16148-201ENSMUST00000119653 893 ntBASIC17.49■□□□□ 0.39
Ccl1P10146 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccl1P10146 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms